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. 2021 Dec 21;11:24365. doi: 10.1038/s41598-021-03834-3

Table 2.

Oligonucleotide primers used in this study.

Primer name Primer Sequence
SeqpBADdkcAF GTAACAAAGCGGGACCAAAGC
SeqpBADdkcAR GGCGTTTCACTTCTGAGTTCG
Primers used for site-directed mutagenesis study of DkcA protein
E40AFW GTTCTGCGCAACCGGGCTGGTGGTGAC
E40AREV CCCGGTTGCGCAGAACAGAATCAAAAACAGAATGGCATAAAC
R133AFW CCTGGCGGCCTTTGTGCCGATAGTCCGAACCTTC
R133AREV CACAAAGGCCGCCAGGATAATGGTTTTCCCGC
R139AFW GATAGTCGCAACCTTCGCGCCGTTTGTG
R139AREV GAAGGTTGCGACTATCGGCACAAAGCGCG
Primers used to knock out arnT from wild type K. pneumoniae ST258 background
arnT_KO_forward GGGGCGCTAAAGCGCGGCTGGCTTGAGCGCGATGAGGCCCGCGGCGCGCTGTATCTGTTACGAATAAGGGACAGTGAAGAAGGAACACC
arnT_KO_reverse ATAGGTCGGCAGTTTGCCTTTGGCGATACTGAAGAACAGGAACGGCATCGCCACCCAACCCTGCAGGAATTCGATGTGTAGGCTG
Primers used for the verification of insertion of arnT knock out cassette consisting apramycin selection marker
P1F AATATTGAATTCCCTGCTGGACTGCATCCATCG
P2R CGCTGCGCTTTACATTTGGCAG
P3F CCTGCCAAATGTAAAGCGCAGC
P4R ATTAATAAGCTTCAGAATGACAATGCCCACGACGATC
Primers used for cloning arnT into expression vector
KparnT1 ATTATACATATGATGAAAAGCATTCGCTATGGCGTCTC
KparnT2 AATATTTCTAGATTATTGCGGCAGGTACTGAAGGAAAAC