Table 5.
Description | Gene markers | None | Purity | ||
---|---|---|---|---|---|
Cor | p-Value | Cor | p-Value | ||
CD8+T cell | CD8A | -0.005 | 0.910 | -0.033 | 0.475 |
CD8B | -0.028 | 0.521 | -0.058 | 0.217 | |
T cell (general) | CD3D | -0.001 | 0.973 | -0.053 | 0.260 |
CD3E | 0.053 | 0.221 | 0.011 | 0.810 | |
CD2 | 0.024 | 0.584 | -0.024 | 0.611 | |
B cell | CD19 | 0.022 | 0.618 | -0.006 | 0.904 |
CD79A | 0.026 | 0.542 | -0.011 | 0.806 | |
Monocyte | CD86 | 0.016 | 0.717 | -0.034 | 0.466 |
CD115(CSF1R) | 0.165 | *** | 0.124 | ** | |
TAM | CCL2 | 0.125 | ** | 0.122 | ** |
CD68 | -0.020 | 0.641 | -0.052 | 0.267 | |
IL10 | 0.083 | 0.055 | 0.054 | 0.243 | |
M1 macrophage | INOS(NOS2) | 0.554 | *** | 0.537 | *** |
IRF5 | -0.214 | *** | -0.266 | *** | |
COX2(PTGS2) | 0.227 | *** | 0.245 | *** | |
M2 macrophage | CD163 | 0.191 | *** | 0.156 | *** |
VSIG4 | 0.079 | 0.069 | 0.024 | 0.610 | |
MS4A4A | 0.154 | *** | 0.120 | * | |
Neutrophils | CD66b(CEACAM8) | 0.087 | * | 0.095 | 0.041 |
CD11b(ITGAM) | 0.093 | * | 0.055 | 0.240 | |
CCR7 | 0.239 | *** | 0.195 | *** | |
NK | KIR2DL1 | 0.316 | *** | 0.305 | *** |
KIR2DL3 | 0.230 | *** | 0.214 | *** | |
KIR2DL4 | 0.061 | 0.161 | 0.045 | 0.339 | |
KIR3DL1 | 0.309 | *** | 0.309 | *** | |
KIR3DL2 | 0.275 | *** | 0.254 | *** | |
KIR3DL3 | 0.130 | ** | 0.109 | * | |
KIR2DS4 | 0.274 | *** | 0.265 | *** | |
Dendritic cell | HLA-DPB1 | 0.080 | 0.066 | 0.032 | 0.499 |
HLA-DQB1 | 0.120 | ** | 0.087 | 0.062 | |
HLA-DRA | 0.048 | 0.264 | 0.001 | 0.984 | |
HLA-DPA1 | 0.094 | * | 0.048 | 0.302 | |
BDCA-1(CD1C) | 0.245 | *** | 0.214 | *** | |
BDCA-4(NRP1) | 0.683 | *** | 0.668 | *** | |
CD11c | -0.032 | 0.455 | -0.053 | 0.259 | |
Th1 | T-bet (TBX21) | 0.338 | *** | 0.330 | *** |
STAT4 | 0.224 | *** | 0.181 | *** | |
STAT1 | 0.027 | 0.533 | -0.013 | 0.779 | |
IFN-γ(IFNG) | -0.066 | 0.128 | -0.109 | * | |
TNF-α(TNF) | 0.032 | 0.454 | -0.003 | 0.950 | |
Th2 | GATA3 | 0.043 | 0.326 | 0.053 | 0.259 |
STAT6 | 0.228 | *** | 0.226 | * | |
STAT5A | 0.061 | 0.157 | 0.009 | 0.848 | |
IL13 | 0.101 | * | 0.125 | ** | |
Tfh | BCL6 | 0.303 | *** | 0.306 | *** |
IL21 | 0.005 | 0.901 | 0.000 | 1.000 | |
Th17 | STAT3 | 0.437 | *** | 0.437 | *** |
IL17A | 0.024 | 0.577 | 0.003 | 0.942 | |
Treg | FOXP3 | 0.004 | 0.919 | -0.042 | 0.369 |
CCR8 | 0.040 | 0.363 | 0.007 | 0.879 | |
STAT5B | 0.452 | *** | 0.458 | *** | |
TGFβ(TGFB1) | 0.506 | *** | 0.504 | *** | |
T cell exhaustion | PD-1(PDCD1) | -0.076 | 0.078 | -0.110 | * |
CTLA4 | -0.075 | 0.083 | -0.124 | ** | |
LAG3 | -0.094 | * | -0.133 | ** | |
TIM3(HAVCR2) | 0.024 | 0.578 | -0.002 | 0.965 | |
GZMB | 0.213 | *** | 0.209 | *** |
*p < 0.05. **p < 0.01. ***p < 0.001.