Binding characteristics of synthesized compounds (8a–8g and 9a–9d) and references against COX-2 protein.
Compound | BE | Bonding interaction | Bond length(Å) | Bond angle (°) | Bond type |
---|---|---|---|---|---|
Celecoxib | −7.2. | Lys 235 CZ⋯HN | 2.4 | 118.3 | H–don |
8a | −5.6 | Arg 293 CB⋯OH | 2.5 | 108.8 | H–acc |
Asn 556 CZ⋯HN | 2.7 | 112.7 | H–don | ||
8b | −8.7 | Asn 268 CB⋯OS | 2.6 | 100.3 | H–acc |
8c | −9.4 | Gly 310 CB⋯ON | 2.6 | 119.3 | H–acc |
Gln 313 CB⋯OS | 2.4 | 101.0 | H–acc | ||
8d | −8.6 | Asn 268 CB⋯OC | 2.6 | 86.1 | H–acc |
Asn 268 CA⋯OS | 2.2 | 106.3 | H–acc | ||
8e | −9.0 | Asn 268 CB⋯OS | 2.1 | 91.1 | H–acc |
Asn 268 CA⋯OC | 2.7 | 104.7 | H–acc | ||
Arg 414 CZ⋯ON | 2.5 | 116.0 | H–acc | ||
8f | −8.5 | Asp 143 CA⋯OC | 2.4 | 117.9 | H–acc |
Asp 143 CZ⋯OC | 2.6 | 104.9 | H–acc | ||
8g | −8.6 | Asn 567 CA⋯OS | 2.5 | 66.7 | H–acc |
Asn 567 CZ⋯OS | 2.2 | 78.4 | H–acc | ||
Gln 336 CZ⋯OC | 2.6 | 90.3 | H–acc | ||
Gln 336 CZ⋯HO | 1.9 | 98.7 | H–don | ||
9a | −8.0 | Asp 143 CB⋯OH | 2.3 | 89.9 | H–acc |
9b | −8.7 | Asn 556 CZ⋯HN | 2.2 | 99.7 | H–don |
9c | −7.1 | Ser 457 CB⋯HN | 2.6 | 120.0 | H–don |
9d | −7.3 | Asn 556 CZ⋯OC | 2.2 | 117.3 | H–acc |