Table 1.
Sample | Clean Data (bp) | HQ Clean Data (bp) | Q30 | GC |
---|---|---|---|---|
GF_1 | 15375727800 | 14965534035 (97.33%) | 14372884127 (96.04%) | 6637373901 (44.35%) |
GF_2 | 17141768700 | 14965534035 (97.12%) | 15943146337 (95.77%) | 7477704890 (44.92%) |
GF_3 | 12268004700 | 14965534035 (96.99%) | 11454639659 (96.26%) | 5280700810 (44.38%) |
GF_4 | 17644711200 | 14965534035 (97.12%) | 16443803331 (95.87%) | 7735202025 (45.10%) |
GF_5 | 17372614800 | 14965534035 (97.27%) | 16214206723 (95.95%) | 7518644939 (44.49%) |
GF_6 | 17217536700 | 14965534035 (97.17%) | 16041939269 (95.89%) | 7570524208 (45.25%) |