Used in figure |
Figure 1B and C
|
Figures 1B, C, 2B (after polarization), Figure 3D (LT mode), Figure 3G
|
Figures 1E and 2B (before polarization), Figure 3D (I mode, FS mode) |
Figure 2—figure supplement 1
|
|
0.1 |
0.1 |
0.1 |
0.2 |
|
905 |
905 |
905 |
905 |
|
0.02 |
0.02 |
0.02 |
0.06 |
|
|
16 |
16 |
16 |
|
14 |
14 |
14 |
14 |
|
|
15 |
14 |
40 |
|
160 |
180 |
160 (200 for FS mode in Figure 3D) |
180 |
|
40 |
20 |
40 (50 for FS mode in Figure 3D) |
20 |
|
|
|
160 |
|
|
|
70 |
40 (30 for FS mode in Figure 3D) |
300 |
|
66° |
90° |
66° |
90° |
|
90° |
90° |
90° |
90° |
|
|
90° |
66° |
90° |
|
|
90° |
90° |
90° |
With noise
|
Used in figure |
Figure 4A and B
|
Figure 4A and B
|
|
|
|
0.005 |
0.005 |
|
|
|
|
0.1 |
|
|
|
0.1 |
0.1 |
|
|
With endoderm cells
|
Used in figure |
Figure 5D
|
Figure 5D
|
Figure 5D
|
|
|
Soft
|
Stiff
|
Soft
|
Stiff
|
Soft
|
Stiff
|
|
|
0.05 |
0.5 |
0.05 |
0.5 |
0.05 |
0.5 |
|
|
1,000 |
1,000 |
1,000 |
1,000 |
1,000 |
1,000 |
|
|
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
|
|
0 |
0 |
0 |
0 |
0 |
0 |
|
|
|
|
10 |
10 |
16 |
16 |
|
All the other s not listed above are 20.The s not listed for the ‘with noise’ and ‘with endoderm’ part are the same as the part without noise or endoderm.in the subscripts of parameter names mean ‘leader,’ ‘trailer,’ ‘endoderm,’ and ‘substrate,’ respectively.* is as listed in equations in the Materials and methods section. |