Table 2.

Summary result of the SNP types.

	Transitions		Transversions
Type of SNP	A/G	C/T	A/C	A/T	G/T	C/G
Number of sites	15,875	16,010	5513	7476	5288	3913
Frequencies	29.36%	29.61%	10.20%	13.83%	9.78%	7.24%
Total	31,885 (59.96%)		22,190 (41.04%)