Table 1.
Carotenoid biosynthetic genes identified in cabbage.
| Enzyme | Arabidopsis thaliana | B. olerecea | |||
|---|---|---|---|---|---|
| Syntenic Orthologs | Non-Syntenic Orthologs | ||||
| LF | MF1 | MF2 | |||
| DXS | AT4G15560 | BoDXS.1 (Bol020307) | BoDXS.2 (Bol005061) | - | BoDXS.3 (Bol005062) |
| DXR | AT5G62790 | BoDXR.1 (Bol019430) | - | BoDXR.2 (Bol019181) | - |
| MCT | AT2G02500 | - | BoMCT (Bol015155) | - | - |
| CMK | AT2G26930 | BoCMK (Bol027780) | - | - | - |
| MDS | AT1G63970 | BoMDS.1 (Bol021045) | - | BoMDS.2 (Bol022634) | - |
| HDS | AT5G60600 | BoHDS (Bol003103) | - | - | - |
| HDR | AT4G34350 | BoHDR.1 (Bol013657) | - | BoHDR.2 (Bol001484) | - |
| IPPI1 | AT5G16440 | - | BoIPPI1 (Bol034402) | - | - |
| IPPI2 | AT3G02780 | BoIPPI2.1 (Bol000950) | BoIPPI2.2 (Bol001738) | BoIPPI2.3 (Bol002232) | - |
| GGPS1 | AT4G36810 | BoGGPS1 (Bol028967) | - | - | - |
| GGPS2 | AT2G23800 | BoGGPS2 (Bol045796) | - | - | - |
| GGPS3 | AT3G14550 | BoGGPS3.1 (Bol005099) | - | BoGGPS3.2 (Bol025714) | - |
| GGPS7 | AT2G18620 | - | - | - | - |
| GGPS8 | AT3G14510 | - | - | - | - |
| GGPS11 | AT3G29430 | - | - | - | - |
| GGPS4 | AT2G18640 | - | - | - | - |
| GGPS6 | AT1G49530 | - | - | - | - |
| GGPS9 | AT3G14530 | - | - | - | - |
| GGPS10 | AT3G20160 | - | - | - | - |
| GGPS12 | AT3G32040 | - | - | - | - |
| GGR | AT4G38460 | BoGGR (Bol000792) | - | - | - |
| PSY | AT5G17230 | BoPSY.1 (Bol019820) | BoPSY.2 (Bol034439) | BoPSY.3 (Bol021326) | - |
| PDS3 | AT4G14210 | - | BoPDS3.1 (Bol009962) | BoPDS3.2 (Bol016089) | - |
| Z-ISO | AT1G10830 | BoZ-ISO (Bol036691) | - | - | - |
| ZDS | AT3G04870 | - | BoZDS (Bol003131) | - | - |
| CRTISO | AT1G06820 | - | - | BoCRTISO (Bol004146) | - |
| CRTISO2 | AT1G57770 | - | - | BoCRTISO2 (Bol016311) | - |
| LYC | AT3G10230 | BoLYC (Bol011368) | - | - | - |
| LUT2 | AT5G57030 | BoLUT2.1 (Bol037991) | BoLUT2.2 (Bol026053) | - | - |
| CHY1 | AT4G25700 | BoCHY1.1 (Bol039555) | BoCHY1.2 (Bol042254) | - | - |
| CHY2 | AT5G52570 | BoCHY2.1 (Bol030235) | - | BoCHY2.2 (Bol045243) | - |
| LUT5 | AT1G31800 | - | BoLUT5.1 (Bol027064) | - |
BoLUT5.2 (Bol027080)
BoLUT5.3 (Bol014196) |
| CYP97B3 | AT4G15110 | - | - | BoCYP97B3 (Bol028312) | - |
| LUT1 | AT3G53130 | - | - | - | - |
| ZEP | AT5G67030 | BoZEP.1 (Bol027222) | - | BoZEP.2 (Bol019241) | - |
| VDE | AT1G08550 | BoVDE (Bol041221) | - | - | - |
| NSY | AT1G67080 | - | BoNSY (Bol045096) | - | - |
| CCD7 | AT2G44990 | - | BoCCD7 (Bol021707) | - | - |
| CCD8 | AT4G32810 | BoCCD8.1 (Bol017864) | - | - | BoCCD8.2 (Bol000605) |
| NCED2 | AT4G18350 | BoNCED2.1 (Bol009433) | BoNCED2.2 (Bol037062) | - | - |
| NCED3 | AT3G14440 | BoNCED3.1 (Bol005093) | BoNCED3.2 (Bol011830) | BoNCED3.3 (Bol035582) | - |
| NCED4 | AT4G19170 | BoNCED4.1 (Bol009345) | - | BoNCED4.2 (Bol029878) | - |
| NCED5 | AT1G30100 | BoNCED5 (Bol022516) | - | - | - |
| NCED6 | AT3G24220 | BoNCED6 (Bol007451) | - | - | - |
| NCED9 | AT1G78390 | BoNCED9.1 (Bol027485) | BoNCED9.2 (Bol018961) | - | - |
| ABA2 | AT1G52340 | BoABA2.1 (Bol000478) | BoABA2.2 (Bol035060) | - | - |
| AAO3 | AT2G27150 | - | BoAAO3.1 (Bol026459) | - | - |