Table 2.
Type of Obstacle | Protein-Mediated Fork Arrest | Structure-Forming DNA Sequence | Telomere-Specific Replication Stress | Aphidicolin Induced Replication Stress | |
---|---|---|---|---|---|
System description | Site-specific RFB blocking a single replisome in a polar manner | Expanded trinucleotide repeats forming hairpin structures that stall replisomes | Stalled replisomes at telomere repeats in telomerase-negative cells |
Telomere-specific replication stress induced by POT1 dysfunctions | Global replication fork stalling induced |
Organism | S. pombe | S. cerevisiae | S. cerevisiae | human cell lines | human cell lines |
Relocation and anchorage requirements | ● Rad51-dependent fork remodeling ● Pli1 ● SUMO chain ● Rfp1-Slx8, ● Rfp2-Slx8 ● NPC-anchorage site unknown |
● Nascent DNA degradation (by Mre11, Exo1, Dna2) ● Mms21 ● SUMOylation of RPA, Rad52, Rad59 ● Slx5-SUMO interaction ● Nup1, Nup84 |
● Nup1 | ● F-actin polymerization ● ATR pathway ● Nup62, Nup153, TPR |
● F-actin polymerization |
Relocation outcomes | Ulp1-NPCs alleviate inhibitory effect of SUMO chains on HR-mediated fork restart | Rad51 loading to promote error free fork restart and preventing CAG repeat instability | Promoting conservative fork restart pathway to avoid error-prone Rad51-dependent SCR | Preventing SCR at telomeres to promote the maintenance of repetitive DNA | Promoting replication stress response to ensure fork restart and prevent mitotic abnormalities. |
Reference | [33] | [32,34,97] | [34] | [36] | [35] |