Table 3.
Proportional expression of CAZy families involved in cell wall degradation.
| CAZy family | Relative Transcript Abundance |
|---|---|
| Cellulose | |
| GH3 | 7.0 |
| GH5 | 3.7 |
| GH9 | 1.9 |
| GH51 | 1.2 |
| GH94 | 1.2 |
| GH1 | 1.0 |
| GH8 | 0.4 |
| GH48 | 0.2 |
| GH45 | 0.2 |
| GH74 | 0.2 |
| GH6 | 0.1 |
| GH44 | 0.03 |
| GH124 | 0.02 |
| Hemicellulose | |
| GH3 | 7.0 |
| GH43 | 6.3 |
| GH2 | 5.5 |
| GH5 | 3.7 |
| CE1 | 2.6 |
| CE4 | 1.9 |
| GH16 | 1.5 |
| GH95 | 1.3 |
| GH10 | 1.3 |
| GH51 | 1.2 |
| GH36 | 1.2 |
| GH92 | 1.1 |
| Other GH (21) | 8.7 |
| Other CE (6) | 2.7 |
| Pectin | |
| GH28 | 1.7 |
| PL1 | 1.5 |
| GH78 | 1.4 |
| GH53 | 1.2 |
| CE12 | 0.9 |
| GH4 | 0.6 |
| GH4 | 0.6 |
| Other GH (8) | 2.9 |
| Other PL (5) | 0.8 |
| Other CE (2) | 0.6 |
| Starch | |
| GH13 | 7.9 |
| GH31 | 1.8 |
| GH77 | 0.9 |
| Other GH (8) | 2.7 |
Note: The relative abundance of transcripts is defined as the proportion of transcripts for a given family in the total of all CAZyme (GH, CE, and PL only) transcripts targeting each plant polysaccharide.