Table 1.
List of significantly upregulated genes in chicken small intestinal mucosa in response to C. perfringens infection.
| Gene ID# | FDR | Chromosome | Gene Symbol | Description | Absolute Fold Change |
|---|---|---|---|---|---|
| ENSGALT00000099249 | 0.001 | 9 | PCYT1A | phosphate cytidylyltransferase 1, choline, alpha | 26.26 |
| ENSGALT00000065275 | 0 | 2 | CBX3 | chromobox 3 (CBX3) | 25.65 |
| ENSGALT00000102383 | 0.026 | 12 | FLNB | filamin B (FLNB) | 25.32 |
| ENSGALT00000080045 | 0 | 10 | VPS33B, | late endosome and lysosome associated | 24.22 |
| ENSGALT00000047160 | 0.012 | 7 | SPEG | complex locus [SourceNCBIgene; Acc429033] 0 | 20.46 |
| ENSGALT00000017218 | 0.013 | 3 | STRN | striatin [SourceHGNC Symbol;AccHGNC11424] 00 | 18.08 |
| ENSGALT00000103665 | 0.044 | 31 | NA | 16.51 | |
| ENSGALT00000065256 | 0.025 | 3 | DAAM2 | dishevelled associated activator of morphogenesis | 16.38 |
| ENSGALT00000101515 | 0.008 | 28 | TCF3 | transcription factor 3 | 12.86 |
| ENSGALT00000108349 | 0 | 17 | NACC2 | NACC family member | 12.76 |
| ENSGALT00000095627 | 0.005 | 33 | CCS | copper chaperone for superoxide dismutase | 12.64 |
| ENSGALT00000082640 | 0.013 | 33 | NACA | nascent polypeptide associated complex subunit | 12.29 |
| ENSGALT00000047943 | 0.001 | 15 | DEP | domain containing 5 [SourceNCBI gene; Acc416956] | 11.39 |
| ENSGALT00000087703 | 0 | 1 | NA | 11.32 | |
| ENSGALT00000094693 | 0.001 | 26 | NA | 10.12 | |
| ENSGALT00000026339 | 0.039 | 3 | GSTA2 | Glutathione S-Transferase 2 | 9.41 |
| ENSGALT00000012083 | 0.009 | 9 | PCYT1A | phosphate cytidylyltransferase 1, choline, alpha | 8.66 |
| ENSGALT00000090554 | 0.018 | NA | 7.86 | ||
| ENSGALT00000074687 | 0 | 20 | MYL9 | myosin, light chain 9, regulatory | 7.79 |
| ENSGALT00000014587 | 0.003 | 3 | EPCAM | epithelial cell adhesion | 6.86 |
| ENSGALT00000091530 | 0.012 | 6 | NA | 6.45 | |
| ENSGALT00000095666 | 0 | 2 | SLC4A7 | solute carrier family 4 member | 6.36 |
| ENSGALT00000018245 | 0.024 | 4 | NA | 6.08 | |
| ENSGALT00000050930 | 0.013 | 23 | PUM1 | pumilio RNA binding | 6.01 |
| ENSGALT00000081307 | 0.001 | 2 | STT3B | STT3B, catalytic subunit | 5.98 |
| ENSGALT00000067100 | 0.011 | 1 | ATP2B1 | ATese plasma membrane | 5.52 |
| ENSGALT00000063811 | 0.008 | Z | ribosomal | ribosomal protein S23 | 5.36 |
| ENSGALT00000107263 | 0.039 | 1 | FNDC3A | fibronectin type III | 5.30 |
| ENSGALT00000099291 | 0.029 | 28 | GATAD2A | GATA zinc finger domain containing | 5.13 |
| ENSGALT00000092961 | 0.019 | 25 | MTMR11 | myotubularin related protein 11 [SourceHGNC | 4.46 |
| ENSGALT00000092785 | 0.016 | NA | 4.29 | ||
| ENSGALT00000060227 | 0.005 | 14 | HBM | hemoglobin subunit mu | 4.26 |
| ENSGALT00000056811 | 0.012 | 30 | DNM2 | dynamin 2 [SourceHGNC Symbol;AccHGNC2974] 0 | 4.17 |
| ENSGALT00000057600 | 0.013 | 1 | IL17D | interleukin 17D [SourceHGNC Symbol;AccHGNC5984] 0 | 4.07 |
| ENSGALT00000070149 | 0.045 | 31 | DHDH | dihydrodiol dehydrogena | 4.04 |
| ENSGALT00000094063 | 0.045 | 16 | NA | 3.82 | |
| ENSGALT00000026767 | 0.026 | 3 | PBK | PDZ binding kinase | 3.82 |
| ENSGALT00000033333 | 0.012 | 8 | LMO4 | LIM domain only | 3.81 |
| ENSGALT00000098491 | 0.004 | 6 | NA | 3.50 | |
| ENSGALT00000053882 | 0.031 | 17 | NA | 3.36 | |
| ENSGALT00000089781 | 0.001 | 1 | DCN | decorin (DCN), mRNA | 3.31 |
| ENSGALT00000036373 | 0.04 | 1 | HBBA | hemoglobin beta, subunit A [SourceNCBI | 3.20 |
| ENSGALT00000038226 | 0.035 | 15 | SMTN | smoothelin [SourceNCBI gene; Acc100858894] 00 | 3.20 |
| ENSGALT00000104581 | 0.016 | 2 | 2.66 | ||
| ENSGALT00000043405 | 0.047 | 28 | TIMM13 | translocase of inner mitochondrial membrane | 2.59 |
| ENSGALT00000107499 | 0.047 | 18 | SRSF2 | serine/arginine-rich splicing factor | 2.55 |
| ENSGALT00000068151 | 0.023 | MT | ND6 | NADH dehydrogenase subunit 6 [SourceNCBI | 2.28 |
| ENSGALT00000045265 | 0.045 | 3 | Cystatin | SourceUniProtKB/Swiss-Prot; AccP01038]0000 | 2.11 |