Table 1.
Isolate | Accession | MLST | Coverage | #Contigs | Largest Contig | Total Length | GC(%) | N50 | N75 | L50 | L75 |
---|---|---|---|---|---|---|---|---|---|---|---|
Eco_b1 | SAMN20169821 | 131 | 70 | 81 | 596,711 | 5,127,344 | 50.76 | 218,234 | 124,147 | 8 | 15 |
Eco_b1_cured | SAMN20169822 | 131 | 39 | 77 | 596,711 | 5,133,246 | 50.76 | 222,766 | 124,147 | 8 | 15 |
Eco_b2 | SAMN20169823 | 131 | 54 | 59 | 623,297 | 5,055,866 | 50.75 | 240,470 | 124,868 | 7 | 14 |
Eco_b3 | SAMN20169824 | 7483 | 33 | 68 | 413,140 | 4,918,104 | 50.81 | 192,174 | 102,049 | 10 | 18 |
Eco_b4 | SAMN20169825 | 131 | 62 | 73 | 623,463 | 5,139,954 | 50.74 | 222,558 | 135,897 | 7 | 14 |
Eco_b5 | SAMN20169826 | 58 | 28 | 91 | 345,561 | 4,863,584 | 50.71 | 132,372 | 61,122 | 13 | 25 |
Eco_r1 | SAMN20169827 | 131 | 59 | 72 | 596,712 | 5,195,130 | 50.71 | 222,897 | 124,147 | 7 | 15 |
Eco_r2 | SAMN20169828 | 131 | 60 | 61 | 623,297 | 5,098,506 | 50.75 | 240,470 | 124,868 | 7 | 14 |
Eco_r3 | SAMN20169829 | 7483 | 38 | 63 | 381,423 | 4,918,014 | 50.81 | 213,742 | 119,893 | 9 | 17 |
Eco_r4 | SAMN20169830 | 127 | 57 | 42 | 1,600,676 | 5,006,799 | 50.42 | 410,665 | 217,547 | 3 | 7 |
Eco_r5 | SAMN20169831 | 58 | 31 | 94 | 326,419 | 4,904,693 | 50.68 | 132,372 | 61,122 | 13 | 26 |
J53_Eco_b1 | SAMN20169832 | 10 | 91 | 90 | 414,105 | 4,766,686 | 50.77 | 125,945 | 64,036 | 13 | 26 |