Table 1.
Genetic parameters of 46 SSR markers evaluated on 50 Prunus armeniaca L. accessions.
| Marker | No. of Alleles | PIC Value | Obs Hom |
Obs Het |
Exp Hom |
Exp Het | Ave Het | Ne | I | Fst |
|---|---|---|---|---|---|---|---|---|---|---|
| RPPG1-017 | 6 | 0.374 | 0.8333 | 0.1667 | 0.7193 | 0.2807 | 0.2778 | 1.3846 | 0.4506 | 0.05 |
| RPPG1-026 | 6 | 0.350 | 0.5833 | 0.4167 | 0.5088 | 0.4912 | 0.4861 | 1.9459 | 0.6792 | 0.02 |
| RPPG1-032 | 5 | 0.362 | 0.5417 | 0.4583 | 0.5026 | 0.4974 | 0.4922 | 1.9692 | 0.6853 | 0.04 |
| RPPG1-037 | 3 | 0.283 | 0.5208 | 0.4792 | 0.5055 | 0.4945 | 0.4894 | 1.9584 | 0.6825 | 0.07 |
| RPPG1-041 | 2 | 0.196 | 0.7083 | 0.2917 | 0.5509 | 0.4491 | 0.4444 | 1.8 | 0.6365 | 0.02 |
| RPPG2-011 | 1 | 0.104 | 0.4167 | 0.5833 | 0.5825 | 0.4175 | 0.4132 | 1.7041 | 0.6036 | 0 |
| RPPG2-022 | 1 | 0.104 | 0.8542 | 0.1458 | 0.8634 | 0.1366 | 0.1352 | 1.1563 | 0.2611 | 0.08 |
| RPPG3-026 | 2 | 0.186 | 0.2917 | 0.7083 | 0.4982 | 0.5018 | 0.4965 | 1.9862 | 0.6897 | 0.01 |
| RPPG4-059 | 4 | 0.350 | 0.6458 | 0.3542 | 0.5125 | 0.4875 | 0.4824 | 1.9321 | 0.6755 | 0.01 |
| RPPG4-067 | 2 | 0.203 | 0.9375 | 0.0625 | 0.5318 | 0.4682 | 0.4633 | 1.8633 | 0.656 | 0.04 |
| RPPG4-077 | 3 | 0.284 | 0.2917 | 0.7083 | 0.5377 | 0.4623 | 0.4575 | 1.8432 | 0.65 | 0 |
| RPPG4-084 | 2 | 0.194 | 0.7083 | 0.2917 | 0.5263 | 0.4737 | 0.4688 | 1.8824 | 0.6616 | 0.06 |
| RPPG4-091 | 6 | 0.462 | 0.2917 | 0.7083 | 0.4982 | 0.5018 | 0.4965 | 1.9862 | 0.6897 | 0 |
| RPPG5-018 | 4 | 0.326 | 0.4167 | 0.5833 | 0.5825 | 0.4175 | 0.4132 | 1.7041 | 0.6036 | 0 |
| RPPG5-022 | 3 | 0.284 | 0.4792 | 0.5208 | 0.495 | 0.505 | 0.4998 | 1.9991 | 0.6929 | 0.05 |
| RPPG5-023 | 2 | 0.188 | 0.5208 | 0.4792 | 0.5055 | 0.4945 | 0.4894 | 1.9584 | 0.6825 | 0 |
| RPPG5-025 | 1 | 0.105 | 0.7292 | 0.2708 | 0.5055 | 0.4945 | 0.4894 | 1.9584 | 0.6825 | 0.03 |
| RPPG5-030 | 4 | 0.354 | 0.000 | 1.000 | 0.4947 | 0.5053 | 0.500 | 2.000 | 0.6931 | 0.01 |
| RPPG6-009 | 4 | 0.351 | 0.5 | 0.5 | 0.5167 | 0.4833 | 0.4783 | 1.9168 | 0.6713 | 0.02 |
| RPPG6-032 | 4 | 0.354 | 0.5625 | 0.4375 | 0.495 | 0.505 | 0.4998 | 1.9991 | 0.6929 | 0 |
| RPPG6-033 | 2 | 0.190 | 0.7083 | 0.2917 | 0.4947 | 0.5053 | 0.500 | 2.000 | 0.6931 | 0.05 |
| RPPG7-015 | 4 | 0.353 | 0.2708 | 0.7292 | 0.5055 | 0.4945 | 0.4894 | 1.9584 | 0.6825 | 0.02 |
| RPPG7-026 | 4 | 0.354 | 0.5417 | 0.4583 | 0.643 | 0.357 | 0.3533 | 1.5463 | 0.5383 | 0.04 |
| RPPG7-032 | 3 | 0.279 | 0.875 | 0.125 | 0.4956 | 0.5044 | 0.4991 | 1.9965 | 0.6923 | 0 |
| RPPG8-007 | 1 | 0.107 | 0.875 | 0.125 | 0.5026 | 0.4974 | 0.4922 | 1.9692 | 0.6853 | 0.03 |
| RPPG8-028 | 3 | 0.260 | 0.1875 | 0.8125 | 0.5125 | 0.4875 | 0.4824 | 1.9321 | 0.6755 | 0.01 |
| Aprigms18 | 5 | 0.412 | 0.3542 | 0.6458 | 0.495 | 0.505 | 0.4998 | 1.9991 | 0.6929 | 0 |
| UDP98-405 | 6 | 0.447 | 0.5833 | 0.4167 | 0.5825 | 0.4175 | 0.4132 | 1.7041 | 0.6036 | 0 |
| UDP98-406 | 6 | 0.462 | 0.375 | 0.625 | 0.5026 | 0.4974 | 0.4922 | 1.9692 | 0.6853 | 0.02 |
| UDP98-409 | 4 | 0.337 | 0.125 | 0.875 | 0.5026 | 0.4974 | 0.4922 | 1.9692 | 0.6853 | 0.05 |
| UDP98-411 | 6 | 0.464 | 0.0833 | 0.9167 | 0.4982 | 0.5018 | 0.4965 | 1.9862 | 0.6897 | 0.05 |
| Pchgms4 | 6 | 0.463 | 0.8333 | 0.1667 | 0.7789 | 0.2211 | 0.2188 | 1.2800 | 0.3768 | 0.01 |
| Pchgms5 | 5 | 0.414 | 1.000 | 0.000 | 0.8114 | 0.1886 | 0.1866 | 1.2295 | 0.3341 | 0.06 |
| Bppct007 | 6 | 0.464 | 0.5833 | 0.4167 | 0.5509 | 0.4491 | 0.4444 | 1.800 | 0.6365 | 0.01 |
| Bppct025 | 2 | 0.193 | 0.375 | 0.625 | 0.5658 | 0.4342 | 0.4297 | 1.7534 | 0.6211 | 0 |
| Bppct030 | 6 | 0.462 | 0.3542 | 0.6458 | 0.5441 | 0.4559 | 0.4512 | 1.8221 | 0.6435 | 0.05 |
| PacA10 | 6 | 0.462 | 0.000 | 1.000 | 0.4947 | 0.5053 | 0.5000 | 2.000 | 0.6931 | 0 |
| PacA18 | 6 | 0.464 | 0.2083 | 0.7917 | 0.4956 | 0.5044 | 0.4991 | 1.9965 | 0.6923 | 0.04 |
| PacA33 | 6 | 0.463 | 0.2292 | 0.7708 | 0.5213 | 0.4787 | 0.4737 | 1.9002 | 0.6667 | 0.01 |
| PacA22 | 6 | 0.460 | 0.125 | 0.875 | 0.4947 | 0.5053 | 0.500 | 2.000 | 0.6931 | 0 |
| PacA26 | 6 | 0.462 | 0.375 | 0.625 | 0.4947 | 0.5053 | 0.500 | 2.000 | 0.6931 | 0.02 |
| PacA35 | 4 | 0.35 | 0.500 | 0.500 | 0.6211 | 0.3789 | 0.375 | 1.600 | 0.5623 | 0.01 |
| PacC3 | 2 | 0.20 | 0.4167 | 0.5833 | 0.5088 | 0.4912 | 0.4861 | 1.9459 | 0.6792 | 0.02 |
| PacC25 | 3 | 0.27 | 0.4792 | 0.5208 | 0.5739 | 0.4261 | 0.4217 | 1.7291 | 0.6126 | 0.02 |
| PacA58 | 2 | 0.190 | 0.3125 | 0.6875 | 0.495 | 0.505 | 0.4998 | 1.9991 | 0.6929 | 0 |
| PdavW3 | 4 | 0.352 | 0.3542 | 0.6458 | 0.5441 | 0.4559 | 0.4512 | 1.8221 | 0.6435 | 0.02 |
| Mean | 3.89 | 0.320 | 0.4774 | 0.5226 | 0.5470 | 0.4530 | 0.4483 | 1.8221 | 0.6371 | 0.0228 |
Legend: (Exp Ho) Expected homozygosity, (Exp He) heterozygosity, (Ob He) observed heterozygosity, (Ob Ho) homozygosity, (Ave Het) Average Heterozygosity, Ne = Effective number of alleles, I = Shannon’s information index, Fst = Genetic differentiation.