Table 2.
List of 29 lineages of SARS-CoV-2 observed in Pakistan along with their local and global percentages.
| Clade | Pakistan Lineages |
No of Samples Sequences from Pakistan | Percentage of Lineages in Pakistan | No of Samples Sequenced Globally of Pakistani Lineages | Global Percentage of Pakistani Lineages |
|---|---|---|---|---|---|
| G | B.1.617.2 | 24 | 6 | 158,368 | 0.1178 |
| GH | B.1 | 25 | 6.25 | 85,731 | 0.0638 |
| B.1.351 | 30 | 7.5 | 28,385 | 0.0211 | |
| B.1.36 | 39 | 9.75 | 6059 | 0.0045 | |
| B.1.36.17 | 1 | 0.25 | 2027 | 0.0015 | |
| B.1.36.24 | 1 | 0.25 | 158 | 0.0001 | |
| B.1.36.31 | 18 | 4.5 | 543 | 0.0004 | |
| B.1.36.34 | 5 | 1.25 | 43 | 0.0000 | |
| B.1.36.8 | 1 | 0.25 | 936 | 0.0007 | |
| B.1.468 | 1 | 0.25 | 172 | 0.0001 | |
| B.1.471 | 22 | 5.5 | 350 | 0.0003 | |
| B.1.499 | 2 | 0.5 | 760 | 0.0006 | |
| B.1.523 | 1 | 0.25 | 388 | 0.0003 | |
| B.1.562 | 1 | 0.25 | 53 | 0.0000 | |
| GR | AE.4 | 1 | 0.25 | 20 | 0.0000 |
| B.1.1 | 9 | 2.25 | 48,427 | 0.0360 | |
| B.1.1.1 | 10 | 2.5 | 2774 | 0.0021 | |
| B.1.1.25 | 1 | 0.25 | 1641 | 0.0012 | |
| B.1.1.372 | 1 | 0.25 | 1339 | 0.0010 | |
| B.1.1.413 | 1 | 0.25 | 105 | 0.0001 | |
| B.1.1.448 | 2 | 0.5 | 468 | 0.0003 | |
| C.23 | 6 | 1.5 | 153 | 0.0001 | |
| GRY | B.1.1.7 | 178 | 44.5 | 994,397 | 0.7395 |
| L | B | 5 | 1.25 | 5918 | 0.0044 |
| B.4 | 1 | 0.25 | 439 | 0.0003 | |
| O | B.1.260 | 1 | 0.25 | 168 | 0.0001 |
| B.6 | 3 | 0.75 | 1052 | 0.0008 | |
| B.6.6 | 1 | 0.25 | 1043 | 0.0008 | |
| S | A | 9 | 2.25 | 2694 | 0.0020 |
| Total Pakistani Sequences Analyzed | 400 | No. of Total Global Sequences | 2,302,116 | ||