Skip to main content
. Author manuscript; available in PMC: 2021 Dec 26.
Published in final edited form as: Nat Protoc. 2021 Apr 28;16(5):2471–2498. doi: 10.1038/s41596-021-00505-5

Table 1 ∣.

Primer and probe sequences for senescence and housekeeping genes

Primer sequence (5′–3′) Probe sequence (5′–3′)
Gene (up)
p16INK4a F: GAGCAGCATGGAGCCTTC
R: CGTAACTATTCGGTGCGTTG
Sense: CTCCAGCA
Antisense: TGCTGGAG
p21WAF1/Cip1 F: TCACTGTCTTGTACCCTTGTGC
R: GGCGTTTGGAGTGGTAGAAA
Sense: GGGAGCAG
Antisense: CTGCTCCC
GDNF F: ATGTCCAACCTAGGGTCTGC
R: CATCCCATAACTTCATCTTAAAGTCC
Sense: CCGCCGCC
Antisense: GGCGGCGG
TSPAN13 F: TCAACCTGCTTTACACCTTGG
R: AATCAGCCCGAAGCCAAT
Sense: CTCCAGCA
Antisense: TGCTGGAG
CCND1 F: GCTGTGCATCTACACCGACA
R: TTGAGCTTGTTCACCAGGAG
Sense: AGGAGCTC
Antisense: GAGCTCCT
DYNLT3 F: GTGCTCTACCGGCGTGTC
R: CAGCATTGAAGCCAACCTC
Sense: CTCCTCCA
Antisense: TGGAGGAG
PDLIM4 F: GGATCCACATCGATCCTGAG
R:GCTTGGTCTGCCATCTTCTG
Sense: GCCTGCTG
Antisense: CAGCAGGC
Gene (down)
LMNB1 F: GTGCTGCGAGCAGGAGAC
R: CCATTAAGATCAGATTCCTTCTTAGC
Sense: CCCAGCAG
Antisense: CTGCTGGG
NF1A F: CCAGATTAGGGGGATGGTATG
R: CCCCTTATCTTTCTAAGCATTTCC
Sense: GGGAGCAG
Antisense: CTGCTCCC
EFNB3 F: TGGAACTCGGCGAATAAGAG
R: CGATCTGAGGGTACAGCACA
Sense: CTCTGCCT
Antisense: AGGCAGAG
PATZ1 F: GCAACTTCTGCAGTATCTGTAACC
R: ACCGTGGTGGGTTTTAACAT
Sense: CTCTGCCT
Antisense: AGGCAGAG
SPIN4 F: ACTATTTCCCTACAGCAGAACAGG
R: GCTTGCCCACGAGACTGT
Sense: CCTGGAGA
Antisense: TCTCCAGG
CNTLN F: AAGGCAGCAATACAAGAATTGAA
R: TTGACCTCATCATCTTCACCAG
Sense: TGGCAGAG
Antisense: CTCTGCCA
Gene (reference)
α-tubulin F: CTTCGTCTCCGCCATCAG
R: CGTGTTCCAGGCAGTAGAGC
Sense: GCCTGCTG
Antisense: CAGCAGGC
β-actin F: CCAACCGCGAGAAGATGA
R: CCAGAGGCGTACAGGGATAG
Sense: CAGCCTGG
Antisense: CCAGGCTG