Table C.1.

Functional pathway labels and pathway details from Fig. 5.

Pathway label	Pathway details/webpage link
GLYOXDEG	Superpathway of glycol metabolism and degradation
GLYCOL-TCA-GLYOX-BYPASS	Superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass
P105	TCA cycle IV (2-oxoglutarate decarboxylase)
1269	CMP-3-deoxy-D-manno-octulosonate biosynthesis
2942	L-lysine biosynthesis III
5345	Superpathway of L-methionine biosynthesis (by sulfhydrylation)
5918	Superpathway of heme b biosynthesis from glutamate
6737	Starch degradation V
7392	Taxadiene biosynthesis (engineered)
4FS-7	Phosphatidylglycerol biosynthesis I (plastidic)
REDCITCYC	TCA cycle VI (Helicobacter)
COMPLETE-ARO	Superpathway of aromatic amino acid biosynthesis
FASYN-ELONG	Fatty acid elongation -- saturated
NAGLIPASYN	Lipid IVA biosynthesis (E. coli)
PHOSLIPSYN	Superpathway of phospholipid biosynthesis I (bacteria)
UDPNAGSYN	UDP-N-acetyl-D-glucosamine biosynthesis I