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. 2021 Dec 23;7(4):528–545. doi: 10.3934/microbiol.2021032

Table 1. Taxonomic affiliations of the isolates based on analysis of their 16S rRNA gene sequences.

TGB1 TGB2 TGB3 TGB4 TGB5 TGB6 TGB7
Accession numbers OK287066 OK287067 OK287068 OK287069 OK287070 OK287071 OK287072
Taxonomy
Annotationa Genus Priestia Citrobacter Pseudomonas Stenotrophomonas Burkholderia Providencia Micrococcus
Hierarchy Family Bacillaceae Enterobacteriaceae Pseudomonadaceae Xanthomonadaceae Burkholderiaceae Morganellaceae Micrococcaceae
Class Bacillales Enterobacterales Pseudomonadales Xanthomonadales Burkholderiales Enterobacterales Micrococcales
Order Bacilli Gammaproteobacteria Gammaproteobacteria Gammaproteobacteria Betaproteobacteria Gammaproteobacteria Actinomycetia
Phylum Firmicutes Proteobacteria Proteobacteria Proteobacteria Proteobacteria Proteobacteria Actinobacteria
Sequence analysis
BLASTb Top
hitc
(AN)
Priestiad
megaterium (MT509997.1)
Citrobacter
freundii (MN420979.1)
Pseudomonas aeruginosa
(KY913809.1)
Stenotrophomonas maltophilia.
(MN732977.1)
Burkholderia contaminans
(MW198159.1)
Providencia stuartii
(CP048621.1)
Micrococcus luteus
(MT533939.1)
Query cover 100% 100% 100% 100% 100% 100% 100%
Percent identity 99.1% 100% 100% 99.83% 100% 99.67% 100%
RDP SeqMatch Bacillus Citrobacter Pseudomonas Stenotrophomonas Burkholderia Providencia Micrococcus
Score 0.957 1.0 0.998 0.991 0.998 0.986 1.0
Silva ACT Taxonomy Bacillus Citrobacter Pseudomonas Stenotrophomonas Burkholderia Providencia Micrococcus
Identity 98.92 99.15 99.84 99.83 99.65 98.33 99.81
Score 98 99 99 99 99 99 99
EzBioCloud (Type strains) Top
Hitd
Priestia megaterium
NBRC 15308
Citrobacter europaeus
97/99
Pseudomonas aeruginosa
JCM 5962
Stenotrophomonas pavanii
DSM 2513
Burkholderia contaminans
LMG 233
Providencia thailandensis
C1112
Micrococcus luteus
NCTC 26
Similarity 99.82% 99.32% 99.51% 99.66% 99.65% 99.83% 98.86%

a Based on query cover, % identity, number of hits in BLAST, and results of RDP, Silva and EzBioCloud; b E-values were 0.0 in all BLAST results; c Accession numbers (AN) are given inside parentheses; d previously known as Bacillus megaterium.