Table 1: Deletions in amplifications from 3D-PCR foreign DNA editing assay.
Deletions were detected in amplifications from 3D-PCR foreign DNA editing assay. Numbers in deleted location in EGFP column show numbers from protein coding region. Four of these clones harboring microhomology longer than 5 nucleotides.
| Clone | Deleted location in EGFP |
Deleted length (bp) |
Microhomology |
|---|---|---|---|
| A3Dv1-8 | 58 -> 309 | 252 | GACGGC |
| A3Dv1-17 | 147 -> 193 | 47 | none |
| A3Dv1-29 | 149 -> 421 | 273 | CA |
| A3Dv2-13 | 83 -> 416 | 334 | none |
| A3Dv6-2 | 161 -> 431 | 271 | none |
| A3Dv6-3 | 118 -> 319 | 202 | none |
| A3Dv6-6 | 107 -> 190 | 84 | none |
| A3Dv6-7 | 88 -> 229 | 142 | none |
| A3Dv7-14 | 55 -> 182 | 128 | C |
| A3Dv7-17 | 96 -> 344 | 249 | CGAGGGCGA |
| A3Dv7-22 | 56 -> 470 | 415 | none |
| A3Dv7-86 | 115 -> 195 | 81 | ACCTACGGC |
| A3B-8 | 158 -> 473 | 316 | GCA |
| A3B-26 | 102 -> 344 | 243 | CGAGGGCGA |
| A3B-28 | 91 -> 238 | 148 | none |