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. 2021 Aug 10;6(62):eabf3733. doi: 10.1126/sciimmunol.abf3733

Fig. 3. Sample processing pipeline and Core Lab assays.

Fig. 3.

Nasal swabs are used to measure viral titers, for viral genome sequencing and metagenomics, and for bulk nasal transcriptomics. Serum samples are used to measure inflammatory markers (Olink), anti-SARS and human CoV antibodies, and for untargeted proteomics and untargeted/targeted metabolomics. Whole blood is used for genome-wide association study (GWAS), WES, and CyTOF. Plasma is used for untargeted proteomics and untargeted/targeted metabolomics. PBMCs are used for bulk transcriptomics analysis. EAs are processed for bulk transcriptomics and CyTOF analyses.