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. 2000 Aug;38(8):2923–2928. doi: 10.1128/jcm.38.8.2923-2928.2000

TABLE 1.

Insertion sites of IS6110 in 210 and W strains of M. tuberculosisa

No. Wb Rv gene no.c Cosmid Gene name(s)d
21-4 + Rv0001:Rv0002 MTV029 dnaA/dnaN
21-1 + Rv1135c MTCI65 PPE
21-5 + Rv1371 MTCY2B12 Unknown
21-20 + Rv1469 MTV007 ctpD
21-16 + Rv1754c MTCY28 ATP-GTP binding motif
21-7 Rv1798:Rv1799 MTV049 ATP-GTP binding motif/lppT
21-18 Rv1917c MTCY180 PPE
21-2 + Rv1917c MTCY180 PPE
21-6 + Rv2016 MTV018 Unknown
21-21 Rv2104c:Rv2107 MTCY261 Unknown/PE
21-8 Rv2107:Rv2108 MTCY261 PE/PPE
21-22 + Rv2352c MTCY98 PPE
21-12 + Rv2813:Rv2820c MTCY16B7 DR region/unknown
21-14 + Rv3018c:Rv3019c MTV012 PPE/ESAT6-like gene
21-11 + Rv3019c:Rv3020c MTV012 ESAT6-like gene/PE
21-19 + Rv3128c MTCY164 Unknown
21-13 Rv3178:Rv3179 MTV014 Unknown/ATP-GTP binding motif
21-9 + Rv3179:Rv3180c MTV014 ATP-GTP binding motif/probable coiled-coil domain
21-10 + Rv3326:Rv3327 MTV016 ipl5 site
21-3 + Rv3383c MTV004 idsB
21-15 + Rv3427c:Rv3428c MTCY78 IS21-like element/IS1532
21-17 + Not identified Unknown
W-1 Rv3128c:Rv3129 MTCY164 Unknown/unknown
W-2 Rv2104c:2107 MTCY261 Unknown/PE
a

Sites are in order of appearance on the M. tuberculosis H37Rv genome map (6). 

b

The plus sign indicates that this site of insertion of IS6110 is identical in the W strain. 

c

One gene is listed when the site of insertion is in that gene. Two genes are listed to indicate the ORFs on either side of the insertion site of IS6110

d

Gene names come from the M. tuberculosis H37Rv genome map (6).