Table 1. List of primer sequences used in multiplex PCR for the determination of PMQR determinants.
Target gene | Primer sequences | Amplicon size (bp) | Amplification (30 cycles) | References | ||
---|---|---|---|---|---|---|
Denaturation | Annealing | Extension | ||||
qnrA F | CAGCAAGAGGATTTCTCACG | 630 | 94°C for 30 seconds | 63°C for 90 seconds | 72°C for 90 seconds | Ciesielczuk et al., 2013 [42] |
qnrA R | AATCCGGCAGCACTATTACTC | |||||
qnrD F | CGAGATCAATTTACGGGGAATA | 581 | ||||
qnrD R | AACAAGCTGAAGCGCCTG | |||||
qnrB F | GGCTGTCAGTTCTATGATCG | 488 | ||||
qnrB R | GAGCAACGATGCCTGGTAG | |||||
qnrS F | GCAAGTTCATTGAACAGGGT | 428 | ||||
qnrS R | TCTAAACCGTCGAGTTCGGCG | |||||
oqxAB F | CCGCACCGATAAATTAGTCC | 313 | ||||
oqxAB R | GGCGAGGTTTTGATAGTGGA | |||||
aac(6’)-lb-cr F | TTGGAAGCGGGGACGGAM | 260 | ||||
aac(6’)-lb-cr R | ACACGGCTGGACCATA | |||||
qepA F | GCAGGTCCAGCAGCGGGTAG | 218 | ||||
qepA R | CTTCCTGCCCGAGTATCGTG | |||||
qnrC F | GCAGAATTCAGGGGTGTGAT | 118 | ||||
qnrC R | AACTGCTCCAAAAGCTGCTC |