TABLE 1.
Abbreviations and ontology of brain structures*
| Transcriptome data available (A) | ||||
|---|---|---|---|---|
| Abbreviations | Ontology of brain structures | pcw 15 | pcw 16 | pcw 21 |
| F | Forebrain | |||
| FGM | grey matter of forebrain | |||
| FTS | transient structures of forebrain | |||
| SG | subpial granular zone | |||
| fSG | SG in frontal neocortex | A | ||
| pSG | SG in parietal neocortex | A | ||
| tSG | SG in temporal neocortex | A | A | |
| oSG | SG in occipital neocortex | A | ||
| iSG | SG in insular neocortex | A | ||
| cSG | SG in cingulate neocortex | A | ||
| peSG | SG in periallocortex | |||
| SGpc | SG in perirhinal cortex | A | ||
| SGpas | SG in parasubicular cortex | |||
| SGec | SG in entorhinal cortex | A | ||
| SGprs | SG in presubicular cortex | |||
| SGrs | SG in retrosplenial cortex | |||
| SGiag | SG in agranular insular cortex | |||
| alSG | SG in allocortex | |||
| SGhip | SG in hippocampal proper | |||
| SGsub | SG in subicular cortex | |||
| SGpir | SG in piriform cortex | |||
| MZ | marginal zone | |||
| fMZ | MZ in frontal neocortex | |||
| fMZfp | MZ in frontal polar cortex | A | A | A |
| fMZdl | MZ in dorsolateral prefrontal cortex | A | A | |
| fMZvl | MZ in ventrolateral prefrontal cortex | A | A | |
| fMZor | MZ in orbital frontal cortex | A | ||
| fMZm1 | MZ in posterior frontal cortex (motor cortex) | A | ||
| pMZ | MZ in parietal neocortex | |||
| pMZs1 | MZ in primary somatosensory cortex | A | A | |
| pMZdm | MZ in dorsomedial parietal cortex | A | ||
| pMZpd | MZ in posterodorsal (superior) parietal cortex | A | ||
| pMZpv | MZ in posteroventral (inferior) parietal cortex | A | A | A |
| tMZ | MZ in temporal neocortex | |||
| tMZsl | MZ in superolateral temporal cortex | A | A | A |
| tMZil | MZ in inferolateral temporal cortex | A | A | |
| tMZmt | MZ in medial temporal‐occipital cortex | A | A | A |
| tMZlt | MZ in lateral temporal‐occipital cortex | A | A | |
| tMZph | MZ in posterior parahippocampal cortex | A | A | |
| oMZ | MZ in occipital neocortex | |||
| oMZv1 | MZ in primary visual cortex | A | A | A |
| oMZdm | MZ in dorsomedial extrastriate cortex (V2) | A | A | A |
| oMZvm | MZ in ventromedial extrastriate cortex (VP) | A | A | |
| oMZml | MZ in midlateral extrastriate cortex (area 19) | A | A | |
| iMZ | MZ in insular neocortex | |||
| iMZdg | MZ in dysgranular insular neocortex | A | A | |
| iMZgr | MZ in granular insular neocortex | A | ||
| cMZ | MZ in cingulate neocortex | |||
| cMZr | MZ in rostral cingulate cortex | A | A | A |
| cMZc | MZ in caudal cingulate cortex | A | ||
| peMZ | MZ in periallocortex | |||
| MZpc | MZ in perirhinal cortex | A | A | A |
| MZpas | MZ in parasubicular cortex | |||
| MZec | MZ in entorhinal cortex | A | ||
| MZprs | MZ in presubicular cortex | |||
| MZrs | MZ in retrosplenial cortex | A | ||
| MZiag | MZ in agranular insular cortex | |||
| alMZ | MZ in allocortex | |||
| MZhip | MZ in hippocampal proper | |||
| MZsub | MZ in subicular cortex | |||
| MZpir | MZ in piriform cortex | |||
| CP | cortical plate | |||
| fCP | CP in frontal neocortex | |||
| fCPfp | CP in frontal polar cortex | A | A | A |
| fCPdm | CP in dorsomedial frontal cortex | A | A | |
| fCPdl | CP in dorsolateral prefrontal cortex | A | A | A |
| fCPvl | CP in ventrolateral prefrontal cortex | A | A | |
| fCPor | CP in orbital frontal cortex | A | A | A |
| fCPm1 | CP in posterior frontal cortex (motor cortex) | A | A | A |
| pCP | CP in parietal neocortex | |||
| pCPs1 | CP in primary somatosensory cortex | A | A | A |
| pCPdm | CP in dorsomedial parietal cortex (area 7m) | A | A | A |
| pCPpd | CP in posterosuperior (dorsal) parietal cortex | A | A | A |
| pCPpv | CP in posteroinferior (ventral) parietal cortex | A | A | A |
| tCP | CP in temporal neocortex | |||
| tCPdl | CP in dorsolateral temporal cortex | |||
| tCPa1 | CP in primary auditory cortex | A | A | |
| tCPsl | CP in superolateral temporal cortex | A | A | A |
| tCPps | CP in polysensory temporal cortex | |||
| tCPpi | CP in parainsualr temporal cortex | |||
| tCPvl | CP in ventrolateral temporal cortex | |||
| tCPml | CP in midlateral temporal cortex | A | ||
| tCPil | CP in inferolateral temporal cortex | A | A | A |
| tCPmi | CP in midinferior temporal cortex | A | ||
| tCP36 | CP in rostral midinferior temporal cortex (area 36) | A | A | |
| tCPtf | CP in caudal midinferior temporal cortex (area TF) | A | A | |
| tCPph | CP in posterior parahippocampal cortex | A | A | A |
| tCPmt | CP in medial temporal‐occipital cortex | A | A | A |
| tCPlt | CP in lateral temporal‐occipital cortex | A | A | |
| tCPtp | CP in temporal polar cortex | A | A | |
| oCP | CP in occipital neocortex | |||
| oCPpro | CP in area prostriata | |||
| oCPv1 | CP in primary visual cortex | A | A | A |
| oCPexs | CP in extrastriate cortex | |||
| oCPdm | CP in dorsomedial extrastriate cortex (V2d) | A | A | A |
| oCPvm | CP in ventromedial extrastriate cortex (VP) | A | A | A |
| oCPml | CP in midlateral extrastriate cortex (area 19) | A | A | |
| iCP | CP in insular neocortex | |||
| iCPdg | CP in dysgranular insular cortex | A | A | A |
| iCPgr | CP in granualr insular cortex | A | A | A |
| cCP | CP in cingulate neocortex | |||
| cCPr | CP in rostral cingulate cortex | A | A | A |
| cCPmi | CP in midcingulate cortex | A | ||
| cCPc | CP in caudal cingulate cortex | A | A | A |
| cCPsg | CP in subgenual (subcallosal) cingulate cortex | A | A | |
| peCP | CP in periallocortex | |||
| CPpc | CP in perirhinal cortex | |||
| CPpcr | CP in rostral perirhinal cortex | A | A | |
| CPpcc | CP in caudal perirhinal cortex | A | A | |
| CPpas | CP in parasubicular cortex | |||
| CPec | CP in entorhinal cortex | |||
| CPlec | CP in lateral (anterior) entorhinal cortex | |||
| CPmec | CP in medial (posterior) entorhinal cortex | |||
| CPprs | CP in presubicular cortex | |||
| CPrs | CP in retrosplenial cortex | A | A | |
| CPiag | CP in agranular insular cortex | |||
| alCP | CP in allocortex | |||
| CPhip | CP in hippocampal proper | |||
| CPhipr | CP in rostral hippocampus | A | A | |
| CPhipc | CP in caudal hippocampus | A | ||
| CPsub | CP in subicular cortex | |||
| CPsubr | CP in rostral subicular cortex | |||
| CPsubc | CP in caudal subicular cortex | A | ||
| CPpir | CP in piriform cortex | |||
| SP | subplate zone | |||
| fSP | SP in frontal neocortex | |||
| fSPfp | SP in frontal polar cortex | A | A | A |
| fSPdm | SP in dorsomedial frontal cortex | A | A | |
| fSPdl | SP in dorsolateral prefrontal cortex | A | A | A |
| fSPvl | SP in ventrolateral prefrontal cortex | A | A | |
| fSPor | SP in orbital frontal cortex | A | A | A |
| fSPm1 | SP in posteror frontal cortex (motor cortex) | A | A | A |
| pSP | SP in parietal neocortex | |||
| pSPs1 | SP in primary somatosensory cortex | A | A | A |
| pSPdm | SP in dorsomedial parietal cortex (area 7m) | A | A | A |
| pSPpd | SP in posterosuperior (dorsal) parietal cortex | A | A | A |
| pSPpv | SP in posteroinferior (ventral) parietal cortex | A | A | A |
| tSP | SP in temporal neocortex | |||
| tSPdl | SP in dorsolateral temporal cortex | |||
| tSPa1 | SP in primary auditory cortex | A | A | |
| tSPsl | SP in superolateral temporal cortex | A | A | A |
| tSPps | SP in polysensory temporal cortex | |||
| tSPpi | SP in parainsular temporal cortex | |||
| tSPvl | SP in ventrolateral temporal cortex | |||
| tSPml | SP in midlateral temporal cortex | A | A | |
| tSPil | SP in inferolateral temporal cortex | A | A | A |
| tSPmi | SP in midinferior temporal cortex | A | ||
| tSP36 | SP in rostral midinferior temporal cortex (area 36) | A | A | |
| tSPtf | SP in caudal midinferior temporal cortex (area TF) | A | A | |
| tSPph | SP in posterior parahippocampal cortex | A | A | |
| tSPmt | SP in medial temporal‐occipital cortex | A | A | |
| tSPlt | SP in lateral temporal‐occipital cortex | A | A | |
| tSPtp | SP in temporal polar cortex | A | ||
| oSP | SP in occipital neocortex | |||
| oSPpro | SP in area prostriata | |||
| oSPv1 | SP in primary visual cortex | A | A | A |
| oSPexs | SP in extrastriate cortex | |||
| oSPdm | SP in dorsomedial extrastriate cortex (V2d) | A | A | A |
| oSPvm | SP in ventromedial extrastriate cortex (VP) | A | A | A |
| oSPml | SP in midlateral extrastriate cortex (area 19) | A | A | |
| iSP | SP in insular neocortex | |||
| iSPdg | SP in dysgranular insular cortex | A | A | A |
| iSPgr | SP in granular insular cortex | A | A | A |
| cSP | SP in cingulate neocortex | |||
| cSPr | SP in rostral cingulate cortex | A | A | A |
| cSPmi | SP in midcingulate cortex | A | ||
| cSPc | SP in caudal cingulate cortex | A | A | A |
| cSPsg | SP in subgenual (subcallosal) cingulate cortex | A | A | |
| peSP | SP in periallocortex | |||
| SPpc | SP in perirhinal cortex | A | A | |
| SPpas | SP in parasubicular cortex | |||
| SPec | SP in entorhinal cortex | A | ||
| SPlec | SP in lateral (anterior) entorhinal cortex | |||
| SPmec | SP in medial (posterior) entorhinal cortex | |||
| SPprs | SP in presubicular cortex | |||
| SPrs | SP in retrosplenial cortex | |||
| SPiag | SP in agranular insular cortex | |||
| alSP | SP in allocortex | |||
| SPhip | SP in hippocampal proper | |||
| SPhipr | SP in rostral hippocampal proper | |||
| SPhipc | SP in caudal hippocampal proper | A | ||
| SPsub | SP in subicular cortex | |||
| SPsubr | SP in rostral subicular cortex | |||
| SPsubc | SP in caudal subicular cortex | A | ||
| SPpir | SP in piriform cortex | |||
| IZ | intermediate zone | |||
| fIZ | IZ in frontal neocortex | |||
| fIZfp | IZ in frontal polar cortex | A | A | A |
| fIZdm | IZ in dorsomedial frontal cortex | A | ||
| fIZdl | IZ in dorsolateral prefrontal cortex | A | ||
| fIZvl | IZ in ventrolateral prefrontal cortex | A | A | |
| fIZor | IZ in orbital frontal cortex | A | A | A |
| fIZm1 | IZ in posteror frontal cortex (motor cortex) | A | A | A |
| pIZ | IZ in parietal neocortex | |||
| pIZs1 | IZ in primary somatosensory cortex | A | A | A |
| pIZdm | IZ in dorsomedial parietal cortex (area 7m) | A | A | |
| pIZpd | IZ in posterosuperior (dorsal) parietal cortex | A | A | A |
| pIZpv | IZ in posteroinferior (ventral) parietal cortex | A | A | A |
| tIZ | IZ in temporal neocortex | |||
| tIZdl | IZ in dorsolateral temporal cortex | |||
| tIZa1 | IZ in primary auditory cortex | A | ||
| tIZsl | IZ in superolateral temporal cortex | A | A | A |
| tIZps | IZ in polysensory temporal cortex | |||
| tIZpi | IZ in parainsular temporal cortex | |||
| tIZvl | IZ in ventrolateral temporal cortex | |||
| tIZml | IZ in midlateral temporal cortex | A | ||
| tIZil | IZ in inferolateral temporal cortex | A | A | A |
| tIZmi | IZ in midinferior temporal cortex | |||
| tIZ36 | IZ in rostral midinferior temporal cortex (area 36) | |||
| tIZtf | IZ in caudal midinferior temporal cortex (area TF) | A | ||
| tIZph | IZ in posterior parahippocampal cortex | A | A | |
| tIZmt | IZ in medial temporal‐occipital cortex | A | A | |
| tIZlt | IZ in lateral temporal‐occipital cortex | A | ||
| tIZtp | IZ in temporal polar cortex | |||
| oIZ | IZ in occipital neocortex | |||
| oIZpro | IZ in area prostriata | |||
| oIZv1 | IZ in primary visual cortex | A | A | |
| oIZexs | IZ in extrastriate cortex | |||
| oIZdm | IZ in dorsomedial extrastriate cortex (V2) | A | A | A |
| oIZvm | IZ in ventromedial extrastriate cortex (VP) | |||
| oIZml | IZ in midlateral extrastriate cortex (area 19) | A | ||
| iIZ | IZ in insular neocortex | |||
| iIZdg | IZ in dysgranular insular cortex | A | A | A |
| iIZgr | IZ in granular insular cortex | A | A | A |
| cIZ | IZ in cingulate neocortex | |||
| cIZr | IZ in rostral cingulate cortex | A | A | A |
| cIZmi | IZ in midcingulate cortex | A | A | |
| cIZc | IZ in caudal cingulate cortex | A | A | A |
| cIZsg | IZ in subgenual (subcallosal) cingulate cortex | A | A | |
| peIZ | IZ in periallocortex | |||
| IZpc | IZ in perirhinal cortex | A | ||
| IZec | IZ in entorhinal cortex | |||
| IZlec | IZ in lateral (anterior) entorhinal cortex | |||
| IZmec | IZ in medial (posterior) entorhinal cortex | |||
| IZprs | IZ in presubicular cortex | |||
| IZrs | IZ in retrosplenial cortex | |||
| alIZ | IZ in allocortex | |||
| IZhip | IZ in hippocampal proper | |||
| IZsub | IZ in subicular cortex | |||
| SZ | subventricular zone | |||
| fSZ | SZ in frontal neocortex | |||
| fSZfp | SZ in frontal polar cortex | |||
| fSZfpo | outer SZ in frontal polar cortex | A | A | A |
| fSZfpi | inner SZ in frontal polar cortex | A | A | |
| fSZdm | SZ in dorsomedial frontal cortex | |||
| fSZdmo | outer SZ in dorsomedial frontal cortex | A | ||
| fSZdmi | inner SZ in dorsomedial frontal cortex | A | ||
| fSZdl | SZ in dorsolateral prefrontal cortex | |||
| fSZdlo | outer SZ in dorsolateral prefrontal cortex | A | A | A |
| fSZdli | inner SZ in dorsolateral prefrontal cortex | A | A | |
| fSZvl | SZ in ventrolateral prefrontal cortex | |||
| fSZvlo | outer SZ in ventrolateral prefrontal cortex | A | A | |
| fSZvli | inner SZ in ventrolateral prefrontal cortex | A | ||
| fSZor | SZ in orbital frontal cortex | |||
| fSZoro | outer SZ in orbital frontal cortex | A | A | A |
| fSZori | inner SZ in orbital frontal cortex | A | A | |
| fSZm1 | SZ in posteror frontal cortex (motor cortex) | |||
| fSZm1o | outer SZ in posteror frontal cortex (motor cortex) | A | A | A |
| fSZm1i | inner SZ in posteror frontal cortex (motor cortex) | A | A | |
| pSZ | SZ in parietal neocortex | |||
| pSZs1 | SZ in primary somatosensory cortex | |||
| pSZs1o | outer SZ in primary somatosensory cortex | A | A | A |
| pSZs1i | inner SZ in primary somatosensory cortex | A | A | A |
| pSZdm | SZ in dorsomedial parietal cortex (area 7m) | |||
| pSZdmo | outer SZ in dorsomedial parietal cortex (area 7m) | A | A | A |
| pSZdmi | inner SZ in dorsomedial parietal cortex (area 7m) | A | A | |
| pSZpd | SZ in posterosuperior (dorsal) parietal cortex | |||
| pSZpdo | outer SZ in posterosuperior (dorsal) parietal cortex | A | A | A |
| pSZpdi | inner SZ in posterosuperior (dorsal) parietal cortex | A | A | A |
| pSZpv | SZ in posteroinferior (ventral) parietal cortex | |||
| pSZpvo | outer SZ in posteroinferior (ventral) parietal cortex | A | A | A |
| pSZpvi | inner SZ in posteroinferior (ventral) parietal cortex | A | A | A |
| tSZ | SZ in temporal neocortex | |||
| tSZdl | SZ in dorsolateral temporal cortex | |||
| tSZa1 | SZ in primary auditory cortex | |||
| tSZa1o | outer SZ in primary auditory cortex | A | ||
| tSZa1i | inner SZ in primary auditory cortex | |||
| tSZsl | SZ in superolateral temporal cortex | |||
| tSZslo | outer SZ in superolateral temporal cortex | A | A | |
| tSZsli | inner SZ in superolateral temporal cortex | A | A | |
| tSZps | SZ in polysensory temporal cortex | |||
| tSZpso | outer SZ in polysensory temporal cortex | |||
| tSZpsi | inner SZ in polysensory temporal cortex | |||
| tSZpi | SZ in parainsular temporal cortex | |||
| tSZvl | SZ in ventrolateral temporal cortex | |||
| tSZml | SZ in midlateral temporal cortex | |||
| tSZmlo | outer SZ in midlateral temporal cortex | A | ||
| tSZmli | inner SZ in midlateral temporal cortex | A | ||
| tSZil | SZ in inferolateral temporal cortex | |||
| tSZilo | outer SZ in inferolateral temporal cortex | A | A | A |
| tSZili | inner SZ in inferolateral temporal cortex | A | A | A |
| tSZmi | SZ in midinferior temporal cortex | |||
| tSZ36 | SZ in rostral midinferior temporal cortex (area 36) | |||
| tSZ36o | outer SZ in rostral midinferior temporal cortex (area 36) | |||
| tSZ36i | inner SZ in rostral midinferior temporal cortex (area 36) | |||
| tSZtf | SZ in caudal midinferior temporal cortex (area TF) | |||
| tSZtfo | outer SZ in caudal midinferior temporal cortex (area TF) | A | ||
| tSZtfi | inner SZ in caudal midinferior temporal cortex (area TF) | A | ||
| tSZph | SZ in posterior parahippocampal cortex | A | ||
| tSZpho | outer SZ in posterior parahippocampal cortex | A | ||
| tSZphi | inner SZ in posterior parahippocampal cortex | A | ||
| tSZmt | SZ in medial temporal‐occipital cortex | A | ||
| tSZmto | outer SZ in medial temporal‐occipital cortex | A | A | |
| tSZmti | inner SZ in medial temporal‐occipital cortex | A | A | |
| tSZlt | SZ in lateral temporal‐occipital cortex | |||
| tSZlto | outer SZ in lateral temporal‐occipital cortex | A | A | |
| tSZlti | inner SZ in lateral temporal‐occipital cortex | A | A | |
| tSZtp | SZ in temporal polar cortex | |||
| oSZ | SZ in occipital neocortex | |||
| oSZpro | SZ in area prostriata | |||
| oSZv1 | SZ in primary visual cortex | |||
| oSZv1o | outer SZ in primary visual cortex | A | A | A |
| oSZv1i | inner SZ in primary visual cortex | A | A | A |
| oSZexs | SZ in extrastriate cortex | |||
| oSZdm | SZ in dorsomedial extrastriate cortex (V2) | |||
| oSZdmo | outer SZ in dorsomedial extrastriate cortex | A | A | A |
| oSZdmi | inner SZ in dorsomedial extrastriate cortex | A | A | A |
| oSZvm | SZ in ventromedial extrastriate cortex (VP) | |||
| oSZvmo | outer SZ in ventromedial extrastriate cortex | A | A | A |
| oSZvmi | inner SZ in ventromedial extrastriate cortex | A | A | A |
| oSZml | SZ in midlateral extrastriate cortex (area 19) | |||
| oSZmlo | outer SZ in midlateral extrastriate cortex | A | A | |
| oSZmli | inner SZ in midlateral extrastriate cortex | A | A | |
| cSZ | SZ in cingulate neocortex | |||
| cSZr | SZ in rostral cingulate cortex | A | A | A |
| cSZmi | SZ in midcingulate cortex | A | A | |
| cSZc | SZ in caudal cingulate cortex | A | A | A |
| cSZsg | SZ in subgenual cingulate cortex | A | A | |
| peSZ | SZ in periallocortex | |||
| seSZ | SZ in septal region | |||
| VZ | ventricular zone | |||
| fVZ | VZ in frontal neocortex | |||
| fVZfp | VZ in frontal polar cortex | A | A | A |
| fVZdm | VZ in dorsomedial frontal cortex | A | A | |
| fVZdl | VZ in dorsolateral prefrontal cortex | A | A | |
| fVZvl | VZ in ventrolateral prefrontal cortex | A | A | |
| fVZor | VZ in orbital frontal cortex | A | A | A |
| fVZm1 | VZ in posteror frontal cortex (motor cortex) | A | A | A |
| pVZ | VZ in parietal neocortex | |||
| pVZs1 | VZ in primary somatosensory cortex | A | A | A |
| pVZdm | VZ in dorsomedial parietal cortex (area 7m) | A | A | |
| pVZpd | VZ in posterosuperior (dorsal) parietal cortex | A | A | A |
| pVZpv | VZ in posteroinferior (ventral) parietal cortex | A | A | A |
| tVZ | VZ in temporal neocortex | |||
| tVZdl | VZ in dorsolateral temporal cortex | |||
| tVZa1 | VZ in primary auditory cortex | |||
| tVZsl | VZ in superolateral temporal cortex | A | ||
| tVZps | VZ in polysensory temporal cortex | |||
| tVZpi | VZ in parainsular temporal cortex | |||
| tVZvl | VZ in ventrolateral temporal cortex | |||
| tVZml | VZ in midlateral temporal cortex | A | ||
| tVZil | VZ in inferolateral temporal cortex | A | A | A |
| tVZmi | VZ in midinferior temporal cortex | |||
| tVZ36 | VZ in rostral midinferior temporal cortex (area 36) | |||
| tVZtf | VZ in caudal midinferior temporal cortex (area TF) | A | ||
| tVZph | VZ in posterior parahippocampal cortex | A | A | A |
| tVZmt | VZ in medial temporal‐occipital cortex | A | A | A |
| tVZlt | VZ in lateral temporal‐occipital cortex | A | A | |
| tVZtp | VZ in temporal polar cortex | |||
| oVZ | VZ in occipital neocortex | |||
| oVZpro | VZ in area prostriata | |||
| oVZv1 | VZ in primary visual cortex | A | A | A |
| oVZexs | VZ in extrastriate cortex | |||
| oVZdm | VZ in dorsomedial extrastriate cortex (V2) | A | A | A |
| oVZvm | VZ in ventromedial extrastriate cortex (VP) | A | A | A |
| oVZml | VZ in midlateral extrastriate cortex (area 19) | A | A | |
| cVZ | VZ in cingulate neocortex | |||
| cVZr | VZ in rostral cingulate neocortex | A | A | A |
| cVZmi | VZ in midcingulate neocortex | A | A | |
| cVZc | VZ in caudal cingulate neocortex | A | A | A |
| cVZsg | VZ in subgenual cingulate neocortex | A | A | |
| peVZ | VZ in periallocortex | |||
| VZpc | VZ in perirhinal cortex | |||
| VZpcr | VZ in rostral perirhinal cortex | |||
| VZpcc | VZ in caudal perirhinal cortex | |||
| VZec | VZ in entorhinal cortex | |||
| VZmec | VZ in medial (posterior) entorhinal cortex | A | ||
| VZlec | VZ in lateral (anterior) entorhinal cortex | |||
| VZprs | VZ in presubicular cortex | |||
| VZprsr | VZ in rostral presubicular cortex | |||
| VZprsc | VZ in caudal presubicular cortex | |||
| VZrs | VZ in retrosplenial cortex | |||
| alVZ | VZ in allocortex | |||
| VZhip | VZ in hippocampal proper | |||
| VZhipr | VZ in rostal hippocampal proper | |||
| VZhipc | VZ in caudal hippocampal proper | A | ||
| VZsub | VZ in subicular cortex | |||
| VZsubr | VZ in rostral subicular cortex | |||
| VZsubc | VZ in caudal subicular cortex | A | ||
| OF | outer fiber zone in neocortex | |||
| IF | inner fiber zone in neocortex | |||
| GE | ganglionic eminence (VZ in basal nuclei) | A | ||
| SCB | striatal‐cortical boundary (subpallium‐pallium boundary) | |||
| LGE | lateral ganglionic eminence | A | A | A |
| LGEo | outer portion of lateral ganglionic eminence (SZ) | A | A | |
| LGEi | inner portion of lateral ganglionic eminence (VZ) | A | A | |
| LGEVZ | LGE‐VZ border region | A | A | |
| LMGE | MGE‐Lateral region | A | A | |
| MGE | medial ganglionic eminence | A | A | A |
| MGEo | outer portion of medial ganglionic eminence (SZ) | A | A | |
| MGEi | inner portion of medial ganglionic eminence (VZ) | A | A | |
| CGE | caudal ganglionic eminence | A | A | |
| CGEo | outer portion of caudal ganglionic eminence (SZ) | |||
| CGEi | inner portion of caudal ganglionic eminence (VZ) | |||
| seVZ | VZ in septal region | A | A | |
| scVZ | VZ in subcallosal region | A | A | |
| paVZ | VZ in postamygdaloid region | A | ||
| thVZ | VZ in thalamic region | A | ||
| hyVZ | VZ in hypothalamic portion | A | ||
| RMS | rostral migratory stream | A | A | A |
| RMSv | vertical portion of rostral migratory stream | |||
| RMSvv | VZ part of RMSv | |||
| RMSvg | GE part of RMSv | |||
| RMSvs | SZ part of RMSv | |||
| RMSh | horizontal portion of rostral migratory stream | |||
| RMShv | VZ part of RMSh | |||
| RMShg | GE part of RMSh | |||
| RMShs | SZ part of RMSh | |||
| CalS | callosal sling | A | ||
| DHTC | dentatohippocampal transient cell zone | |||
| DNS | dentate neuroepithelial stem cell zone | |||
| IPTC | interpallidal transient cell zone | |||
| OlfP | olfactory peduncle | |||
| PFG | perifornical gray zone | |||
| PPL | primordial plexiform layer | |||
| ScG | subcallosal gray zone | |||
| TCete | transient cell zone in external capsule | |||
| TCexc | transient cell zone in extreme capsule | |||
| LMS | lateral migratory stream | |||
| VMS | ventral migratory stream | |||
| DMS | dorsal migratory stream | |||
| SMS | septal migratory stream | |||
| SCS | striatal‐cortical sulcus | |||
| CAS | caudal amygdaloid stream | |||
| FPS | permanent structures of forebrain | |||
| Tel | telencephalon (for more details see table 3 in Ding et al. J Comp Neurol, 2016) | |||
| Cx | cerebral cortex | |||
| NCx | neocortex | |||
| FCx | frontal neocortex | |||
| PFC | prefrontal cortex | A | ||
| A10 (FP) | frontal polar cortex | |||
| DFC | dorsolateral prefrontal cortex | |||
| VFC | ventrolateral prefrontal cortex | |||
| OFC | orbital frontal cortex | A | ||
| M1C (A4, M1) | primary motor cortex | A | ||
| PMC (A6) | premortor cortex | A | ||
| PCx | parietal neocortex | |||
| S1C (S1) | primary somatosensory cortex | |||
| SPC | superior parietal cortex | |||
| IPC | inferior parietal cortex | A | ||
| TCx | temporal neocortex | |||
| DLTC | dorsolateral temporal cortex | A | ||
| VLTC | ventrolateral temporal cortex | |||
| PPHC | posterior parahippocampal cortex | |||
| A37 | medial temporal‐occipital cortex | |||
| A38 (TP) | temporal polar cortex | |||
| Ocx | occipital neocortex | |||
| V1C (V1) | primary visual cortex (striate cortex) | |||
| ESOC | extrastriate occipital cortex | |||
| V2 | parastriate cortex | |||
| PSC (A19) | peristriate cortex | |||
| ICx | insular neocortex | |||
| Idg | dysgranular insular cortex | |||
| Ig | granular insular cortex | |||
| CCx | cingulate cortex | |||
| MFC (ACC) | medial frontal cortex (rostral cingulate cortex, areas 32, 24 and 25) | A | A | |
| MCC | midcingulate cortex (area 24mi) | |||
| PCC | caudal cingulate cortex (areas 23 and 31) | |||
| PACx | periallocortex | |||
| PArCx | periarchicortex | |||
| A35 | perirhinal cortex (area 35) | A | A | |
| EC | entorhinal cortex | |||
| LEC | lateral entorhinal cortex | A | A | A |
| MEC | medial entorhinal cortex | A | A | |
| PaS | parasubicular cortex | A | ||
| PrS | presubicular cortex | A | ||
| RSC (RS) | retrosplenial cortex (areas 29 and 30) | |||
| PPCx | peripaleocortex | |||
| Iag | agranular insular cortex | A | A | |
| FI | frontal agranular insular cortex | |||
| TI | temporal agranular insular cortex | |||
| ACx | allocortex | |||
| ArCx | archicortex | |||
| DG | dentate gyrus | A | A | A |
| Hipp | hippocampal proper (CA1‐4) | A | A | A |
| Sub | subicular cortex | |||
| S | subiculum | A | A | |
| ProS | prosubiculum | A | ||
| IG | indusium griseum | |||
| PalCx | paleocortex | |||
| OB | olfactory bulb | A | ||
| AON | anterior olfactory nucleus | |||
| OT | olfactory tubercle | A | A | A |
| Pir | piriform cortex | A | A | A |
| LOA | lateral olfactory area | |||
| PEA | piriform‐entorhinal‐amygdaloid area | |||
| CN | cerebral nuclei | |||
| AMY | amygdaloid complex | A | ||
| AAA | anterior amygdaloid area | |||
| CEN | central nuclear group | A | A | |
| CMN | corticomedial nuclear group | |||
| Co | cortical amygdaloid nucleus | |||
| CoA | anterior cortical nucleus | A | A | A |
| CoP | posterior cortical nucleus | A | ||
| Me | medial nucleus | A | A | |
| AHA | amygdalohippocampal area | |||
| BLN | basolateral nuclear group | |||
| La | lateral nucleus of amygdala | A | A | A |
| BL | basolateral nucleus of amygdala | A | A | A |
| BM | basomedial nucleus of amygdala | A | A | A |
| INA | intercalated nucleus of amygdala | A | A | |
| ATA | amygdaloid transition area | |||
| ASTA | amygdalostriatal transition area | A | A | |
| ACTA | amygdalocortical transition area | |||
| EXA | extended amygdala | |||
| BNST | bed nucleus of stria terminalis | A | A | A |
| BN | basal nuclei (basal ganglia) | |||
| STR | striatum | |||
| Ca | caudate nucleus | A | A | A |
| Pu | putamen | A | A | A |
| NAC | nucleus accumbens | A | A | A |
| GP | globus pallidus | |||
| GPe | external segment of globus pallidus | A | A | A |
| GPi | internal segment of globus pallidus | A | A | A |
| VeP | ventral pallidus | A | A | |
| Cla | claustrum | A | A | A |
| BF | basal forebrain | |||
| SEP | septal nuclei | |||
| MSN | medial septal nucleus | A | A | A |
| LSN | lateral septal nucleus | A | A | A |
| BNM | basal nucleus of Meynert | A | A | A |
| NDB | nucleus of diagonal band | A | A | A |
| SI | substantia innominata | |||
| Die | diencephalon (for more details see table 3 in Ding et al. J Comp Neurol, 2016) | |||
| THM | Thalamus | |||
| DTH | dorsal thalamus | |||
| ANC | anterior nuclear complex of thalamus | A | ||
| AD | anterior dorsal nucleus of thalamus | A | A | |
| AV | anterior ventral nucleus of thalamus | A | A | |
| AM | anterior medial nucleus of thalamus | A | ||
| LD | lateral dorsal nucleus of thalamus | A | A | |
| MNC | medial nuclear complex of thalamus | |||
| MD | mediodorsal nucleus of thalamus | A | A | A |
| Re | Reuniens nucleus | A | ||
| LNC | lateral nuclear complex of thalamus | |||
| VA | vental anterior nucleus of thalamus | A | A | A |
| VL | vental lateral nucleus of thalamus | A | A | |
| VP | vental posterior nucleus of thalamus | |||
| VPM | vental posterior medial nucleus of thalamus | A | A | |
| VPL | vental posterior lateral nucleus of thalamus | A | A | |
| VPI | vental posterior inferior nucleus of thalamus | A | A | |
| VM | ventral medial nucleus of thalamus | A | ||
| LP | lateral posterior nucleus of thalamus | A | A | |
| Pul | pulvinar of thalamus | A | A | A |
| PoN | posterior nuclear complex of thalamus | |||
| LG | lateral geniculate nucleus | |||
| DLG | dorsal lateral geniculate nucleus | A | A | A |
| PG (VLG) | pregeniculate nucleus | |||
| MG | medial geniculate nucleus | A | A | A |
| LSG | limitans/suprageniculate nucleus | A | A | |
| PIL | posterior intralaminar nucleus | |||
| Po | posterior nucleus of thalamus | |||
| ILN | intralaminar nuclear complex of thalamus | |||
| Fa | fasciculosus nucleus of thalamus | |||
| PC | paracentral nucleus of thalamus | |||
| CL | central lateral nucleus of thalamus | |||
| CeM | central medial nucleus of thalamus | |||
| Pf | parafascicular nucleus of thalamus | A | A | A |
| CM | centromedian nucleus of thalamus | A | A | A |
| SPf | subparafascicular nucleus of thalamus | A | A | |
| MiN | midline nuclear comlex | A | ||
| PeVA | periventricular area of thalamus | |||
| IMD | intermediodorsal nucleus of thalamus | |||
| ETH | epithalamus | |||
| HN | habenular nucleus | |||
| MHN | medial habenular nucleus | A | A | A |
| LHN | lateral habenular nucleus | A | A | A |
| PaV | paraventricular nucleus of thalamus | A | A | A |
| Pin | pineal body | A | ||
| VTH | ventral thalamus | |||
| FF | nucleus of the field of Forel | |||
| ZI | zona incerta | A | A | |
| R | reticular nucleus of thalamus | A | A | A |
| SubTH | subthalamus | |||
| STH | subthalamic nucleus | A | A | |
| HTH | hypothalamus | |||
| MnPO | median preoptic nucleus | |||
| PeV | periventricular nucleus | A | ||
| MPN | medial preoptic nucleus | A | ||
| SCN | suprachiasmatic nucleus | |||
| SO | supraoptic nucleus | A | A | |
| AHN | anterior hypothalamic nucleus | A | A | A |
| PV | paraventricular nucleus of hypothalamus | A | ||
| DHA | dorsal hypothalamic area | |||
| TM | tuberomammillary nucleus | |||
| DMH | dorsomedial hypothalamic nucleus | A | A | A |
| VMH | ventromedial hypothalamic nucleus | A | A | A |
| Arc | arcuate nucleus of hypothalamus | A | A | A |
| ME | median eminence | |||
| LT | lateral tuberal nucleus | A | ||
| PMH | posteromedial hypothalamic nucleus | |||
| PMN | premammillary nucleus | |||
| PHN | posterior hypothalamic nucleus | A | A | |
| SUM | supramammillary nucleus | |||
| MM | medial mammillary nucleus | A | A | |
| LM | lateral mammillary nucleus | |||
| LHA | lateral hypothalamic area | A | A | A |
| PeF | perifornical nucleus | |||
| FWM | white matter of forebrain (for details see table 3 in Ding et al. J Comp Neurol, 2016) | |||
| FV | ventricles of forebrain | |||
| LV | lateral ventricle | |||
| 3V | third ventricle | |||
| FSS | surface structures of forebrain (for details see table 3 in Ding et al. J Comp Neurol, 2016) | |||
| M | Midbrain | |||
| MGM | grey matter of midbrain | |||
| MTS | transient structures of midbrain | |||
| MNM | mesencephalic neuromere (mesomere) | |||
| MZM | marginal zone of midbrain | |||
| IZM | intermediate (mantle) zone of midbrain | |||
| IZMro | roof plate of midbrain | |||
| IZMal | alar plate (tectal zone) of midbrain | |||
| IZMba | basal plate of midbrain | |||
| IZMfl | floor plate of midbrain | |||
| VZM | ventricular (matrix) zone of midbrain | |||
| MPS | permanent structures of midbrain (for more details see table 3 in Ding et al. J Comp Neurol, 2016) | |||
| PTR | pretectal region | |||
| PTN | pretectal nuclear complex | A | A | A |
| MTg | midbrain tegmentum | |||
| EW | Edinger‐Westphal nucleus | A | ||
| 3N | oculomotor nucleus | A | A | |
| 4N | trochlear nucleus | |||
| MRF | midbrain reticular formation | A | A | |
| CnF | cuneiform nucleus | |||
| PTg | pedunculotegmental nucleus | A | A | |
| IP | interpeduncular nucleus | A | ||
| RN | red nucleus | A | A | A |
| SN | substantia nigra | A | A | A |
| PBP | parabrachial pigmented nucleus | |||
| VTA | ventral tegmental area | A | A | |
| PAG | periaqueductal gray substance | A | A | |
| DR | dorsal raphe nucleus | A | A | |
| InC | interstitial nucleus of Cajal | |||
| PrC | precommissural nucleus | A | ||
| MTc | midbrain tectum | |||
| SC | superior colliculus | A | A | |
| IC | inferior colliculus | A | A | A |
| PBG | parabigeminal nucleus | A | A | |
| MWM | white matter of midbrain (for details see table 3 in Ding et al. J Comp Neurol, 2016) | |||
| MV | ventricle of midbrain | |||
| Aq | cerebral aqueduct | |||
| MSS | surface structures of midbrain (for details see table 3 in Ding et al. J Comp Neurol, 2016) | |||
| H | Hindbrain | |||
| HGM | grey matter of hindbrain | |||
| HTS | transient structures of hindbrain | |||
| CBT | transient zones of cerebellar cortex | |||
| VeT | transient zones of cerebellar vermis | |||
| VeTe | external granular (germinal) zone of the vermis | |||
| VeTm | marginal zone of the vermis | |||
| VeTp | Purkinje cell zone of the vermis | |||
| VeTi | inner granular cell zone of the vermis | |||
| VeTv | ventricular (germinal) zone of the vermis | |||
| PRVT | transient zones of cerebellar paravermis | |||
| PRVTe | external granular (germinal) zone of the paravermis | |||
| PRVTm | marginal zone of the paravermis | |||
| PRVTp | Purkinje cell zone of the paravermis | |||
| PRVTi | inner granular cell zone of the paravermis | |||
| PRVTv | ventricular (germinal) zone of the paravermis | |||
| CbLT | transient zones of cerebellar lateral hemisphere | |||
| CbLTe | external granular (germinal) zone of lateral hemisphere | |||
| CbLTm | marginal zone of lateral hemisphere | |||
| CbLTp | Purkinje cell zone of lateral hemisphere | |||
| CbLTi | inner granular cell zone of lateral hemisphere | |||
| CbLTv | ventricular (germinal) zone of lateral hemisphere | |||
| CbFT | transient zones of cerebellar flocculus | |||
| CbFTe | external granular (germinal) zone of flocculus | |||
| CbFTm | marginal zone of flocculus | |||
| CbFTp | Purkinje cell zone of flocculus | |||
| CbFTi | inner granular cell zone of flocculus | |||
| CbFTv | ventricular (germinal) zone of flocculus | |||
| TGCbN | transient glia cell group of cerebellar deep nucleus | |||
| CbP | cerebellar plate | |||
| MZCbP | marginal (subpial stream) zone of cerebellar plate | |||
| IZCbP | intermediate (mantle) zone of cerebellar plate | |||
| NTZ | nuclear transitory zone of cerebellar plate | |||
| CTZ | cortical transitory zone of cerebellar plate | |||
| VZCbP | ventricular (neuroepithelial) zone of cerebellar plate | |||
| CbS | cerebellar swelling | |||
| CbSi | internal cerebellar swelling | |||
| CbSe | external cerebellar swelling | |||
| HNM | hindbrain neuromeres | |||
| RhIS | rhombencephalic isthmus | |||
| RhA | rhombomere A | |||
| Rh1 | rhombomere 1 | |||
| Rh2 | rhombomere 2 | |||
| Rh3 | rhombomere 3 | |||
| RhB | rhombomere B | |||
| Rh4 | rhombomere 4 | |||
| RhC | rhombomere C | |||
| Rh5 | rhombomere 5 | |||
| Rh6 | rhombomere 6 | |||
| Rh7 | rhombomere 7 | |||
| RhD | rhombomere D | |||
| Rh8 | rhombomere 8 | |||
| RhL | rhombic lip | |||
| URL | upper (rostral) rhombic lip | A | A | |
| EGL | external granular (germinal) layer of upper rhombic lip | A | A | |
| LRL | lower (caudal) rhombic lip | A | A | |
| EGLL | external granular (germinal) layer of lower rhombic lip | A | ||
| TCC | transient cell columns in pons | |||
| MCCP | medial cell column of pons | |||
| ICCP | intermediate cell column of pons | |||
| LCCP | lateral cell column of pons | |||
| TPC | transient Purkinje cell clusters | A | ||
| PkA | cluster A of Purkinje cells | |||
| PkB | cluster B of Purkinje cells | |||
| PkC | cluster C of Purkinje cells | |||
| PkD | cluster D of Purkinje cells | |||
| PkE | cluster E of Purkinje cells | |||
| PkF | cluster F of Purkinje cells | |||
| PkG | cluster G of Purkinje cells | |||
| PkH | cluster H of Purkinje cells | |||
| MSH | migratory streams in hindbrain | |||
| REMS | rostral (anterior) extramural migratory stream | A | ||
| CEMS | caudal (posterior) extramural migratory stream | A | A | |
| ImMS | intramural migratory stream | |||
| MZH | marginal zone of hindbrain | |||
| MZCb | marginal zone of cerebellum | |||
| MZPn | marginal zone of pons | |||
| MZMo | marginal zone of medulla oblongata | |||
| IZH | intermediate (mantle) zone of hindbrain | |||
| IZHal | alar plate of intermediate zone of hindbrain | |||
| IZHba | basal plate of intermediate zone of hindbrain | |||
| IZHfl | floor plate of intermediate zone of hindbrain | |||
| IZHro | roof plate of intermediate zone of hindbrain | |||
| VZH | ventricular (matrix) zone in hindbrain | |||
| VZCb | ventricular (matrix) zone of cerebellum | A | ||
| VZPn | ventricular (matrix) zone of pons | A | ||
| VZMo | ventricular (matrix) zone of medulla | |||
| PnFlx | pontine flexures | |||
| CrSlp | cranial (metacephalic) slope | |||
| CaSlp | caudal (myelencephalic) slope | |||
| PnbB | pontobulbar body | A | A | |
| RhGv | rhombic grooves | |||
| HPS | permanent structures of hindbrain (for more details see table 3 in Ding et al. J Comp Neurol, 2016) | |||
| Met | metencephalom | |||
| CB | cerebellum | |||
| CBC | cerebellar cortex | |||
| CBV | cerebellar vermis | A | A | |
| CBPV | paravermis of cerebellum | A | A | |
| CBL | lateral hemisphere of cerebellum | A | A | |
| CbDN | cerebellar deep nuclei | |||
| DT | dentate nucleus | A | A | |
| InP | interpositus nucleus | A | ||
| Fas | fastigial nucleus | |||
| Pn | pons | |||
| PN | pontine nucleus | A | A | |
| Mo5 | motor nucleus of trigeminal nerve | A | A | |
| Pr5 | principal sensory nucleus of trigeminal nerve | A | A | |
| 6N | abducens nucleus | A | A | |
| 7N | facial nucleus | A | A | |
| 8Co | cochlear nuclei | A | A | |
| MSO | medial superior olive | A | A | |
| SOC | superior olivary complex | |||
| TrZ | nucleus of trapezoid body | |||
| PnRa | Raphe pontis nucleus | |||
| MnR | median raphe nucleus | |||
| PnG | pontine gamma nucleus | |||
| PB | parabrachial nuclei | |||
| LPB | lateral parabrachial nucleus | A | A | |
| MPB | medial parabrachial nucleus | A | A | |
| RtTg | reticulotegmental nucleus | A | A | |
| NC | nucleus coeruleus | A | A | |
| LLN | nuclei of lateral lemniscus | |||
| DTg | dorsal tegmental nucleus | |||
| LDTg | laterodorsal tegmental nucleus | |||
| PnRF | pontine reticular formation | |||
| Mo | myelencephalon (medulla oblongata) | |||
| Sp5 | spinal trigeminal nucleus | A | A | |
| 8Ve | vestibular nuclei | A | A | |
| Sol | solitary nucleus | A | A | |
| Psol | parasolitary nucelus | A | ||
| 10N | vagal nucleus | A | A | |
| 12N | hypoglossal nucleus | A | A | |
| Amb | ambiguus nucleus | |||
| PrH | prepositus hypoglossal nucleus | A | ||
| MoRa | raphe nuclei in medulla oblongata | |||
| ROb | raphe obscurus nucleus | A | ||
| RMg | raphe magnus nucleus | A | A | |
| IO | inferior olive | A | A | |
| InM | intercalated nucleus of medulla | A | ||
| MoRF | medullary reticular formation | A | ||
| RVRG | rostral ventral respiratory cell group | A | ||
| LRt | lateral reticular nucleus | A | ||
| ECu | external cuneate nucleus | |||
| Cu | cuneate nucleus | A | ||
| Gr | gracile nucleus | A | ||
| HWM | white matter of hindbrain (for details see table 3 in Ding et al. J Comp Neurol, 2016) | |||
| HV | ventricles of hindbrain | |||
| 4V | fourth ventricle | |||
| cec | central canal of medulla oblongata | |||
| HSS | surface structures of hindbrain (for details see table 3 in Ding et al. J Comp Neurol, 2016) | |||
*
Lists all transient structures and main permanent structures used in the present study. For complete and detailed list of permanent brain structures, see Ding et al. J Comp Neurol, 2016.