Antibodies |
|
Rabbit anti-LECT1 (Cnmd) |
Thermo Fisher Scientific |
Cat# PA5-76974; RRID: AB_2720701
|
Rabbit anti-Cyp17a1 |
Abcam |
Cat# ab134910 |
Rabbit anti-DHT |
Mybiosource |
Cat# MBS2042442 |
Rabbit anti-Ddx4/Mvh |
Abcam |
Cat# ab13840; RRID: AB_443012
|
Rabbit anti-Gdf9 |
Abcam |
Cat# ab254323 |
Mouse anti-Stc1 |
Santa Cruz Biotechnology |
Cat# sc-293435 |
Mouse anti-Lhcgr |
Novus |
Cat# NBP2-52504; RRID: AB_2783817
|
Mouse anti-Marcks |
Santa Cruz Biotechnology |
Cat# sc-100777; RRID: AB_1125958
|
Mouse anti-Prkar2b |
Santa Cruz Biotechnology |
Cat# sc-376778 |
Goat anti-Mouse IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 488 |
Thermo Fisher Scientific |
Cat# A-11029; RRID: AB_2534088
|
Goat anti-Rabbit IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 555 |
Thermo Fisher Scientific |
Cat# A-21429; RRID: AB_2535850
|
|
Biological samples |
|
Mouse ovarian tissue |
This study |
N/A |
|
Chemicals, peptides, and recombinant proteins |
|
M2 medium |
Sigma-Aldrich |
Cat# M7167 |
Penicillin-Streptomycin |
GIBCO |
Cat# 15140122 |
Collagenase, Type IV |
GIBCO |
Cat# 17104019 |
TrypLE Express Enzyme (1×) |
GIBCO |
Cat# 12604039 |
PMSG, Pregnant Mare Serum Gonadotropin |
Solarbio |
Cat# P9970 |
hCG, Human Chorionic Gonadotrophin |
SANMA |
N/A |
α-MEM |
GIBCO |
Cat# 12561056 |
FBS, Fetal Bovine Serum |
VisTech |
Cat# SE200-ES |
Insulin-Transferrin-Selenium (ITS -G) (100×) |
GIBCO |
Cat# 41400045 |
Nucleosides (100×) |
Sigma-Aldrich |
Cat# ES-008-D |
Paraformaldehyde |
Sigma-Aldrich |
Cat# P6148 |
Sucrose |
Sigma-Aldrich |
Cat# V900116 |
Recombinant RNase Inhibitor |
TaKaRa |
Cat# 2313B |
KAPA HiFi HotStart ReadyMix |
Roche |
Cat# 7958935001 |
Ampure XP beads |
Beckman Coulter |
Cat# A63882 |
dNTP mix |
Thermo Fisher Scientific |
Cat# R0192 |
Dynabeads M-280 Streptavidin |
Thermo Fisher Scientific |
Cat# 11206D |
Tissue freezing medium (OCT medium) |
Leica |
Cat# 14020108926 |
Goat serum |
GIBCO |
Cat# 16210064 |
PrimeScript RT Master Mix (Perfect Real Time) |
TaKaRa |
Cat# RR036A |
2× SYBR Green PCR Master Mix |
Bimake |
Cat# B21202
|
Dihydrotestosterone, DHT |
Solarbio |
Cat# ID0310 |
Enzalutamide (MDV3100) |
Selleckchem |
Cat# S1250 |
Testosterone |
Solarbio |
Cat# IT0110 |
PEG-400 |
KESHI |
Cat# 25322-68-22 |
Tween-80 |
Solarbio |
Cat# T8360 |
Triton X-100 |
Sigma-Aldrich |
Cat# T9284 |
ProLong Gold Antifade Mountant with DAPI |
Thermo Fisher Scientific |
Cat# P36935
|
|
Critical commercial assays |
|
Quick-RNA Microprep Kit |
Zymo Research |
Cat# R1051 |
DNA Clean & Concentrator-5 (Capped) |
Zymo Research |
Cat# D4014 |
NEBNext Ultra II DNA Library Prep Kit for Illumina |
New England Biolabs |
Cat# E764 |
|
Deposited data |
|
Raw data files and processed data files for ovarian single-cell RNA-seq |
This study |
GEO: GSE142587
|
|
Experimental models: Organisms/strains |
|
Mouse: C57BL/6J |
Vital River |
N/A |
Mouse: BKS-Leprem2Cd479/Gpt |
GemPharmatech |
Cat# T002407 |
Mouse: B6/JGpt-Lepem1Cd25/Gpt |
GemPharmatech |
Cat# T001461 |
|
Oligonucleotides |
|
qPCR primers, see also Table S7
|
This paper |
N/A |
|
Software and algorithms |
|
ImageJ (version: 1.5.3.c) |
NIH |
https://imagej.nih.gov/ij/ |
ZEN |
Zeiss |
http://www.zeiss.com/microscopy/us/products/microscope-software/zen.html/ |
Cutadapt (version: 2.3) |
Read the Docs |
https://cutadapt.readthedocs.io/en/stable/ |
STAR (version: 2.6.0a) |
Github |
https://github.com/alexdobin/STAR |
HTSeq (version: 0.11.2) |
Read the Docs |
https://htseq.readthedocs.io/en/master/history.html#version-0-11-2 |
Scater (version: 1.14.6) |
Bioconductor |
http://bioconductor.org/packages/release/bioc/html/scater.html |
Seurat (version: 3.2.0) |
Satija Lab |
https://satijalab.org/seurat/ |
SCTransform (version: 0.2.1) |
Satija Lab |
https://satijalab.org/seurat/ |
clusterProfiler (version: 3.14.3) |
Bioconductor |
https://bioconductor.org/packages/release/bioc/html/clusterProfiler.html |
GSVA (version: 1.34.0) |
Bioconductor |
https://bioconductor.org/packages/release/bioc/html/GSVA.html |
Monocle 2 (version: 2.14.0) |
Bioconductor |
http://cole-trapnell-lab.github.io/monocle-release |
CellPhoneDB (version: 2.14.0) |
Github |
https://github.com/Teichlab/cellphonedb |
pySCENIC (version: 0.10.3) |
Van de Sande et al. (2020) |
https://pyscenic.readthedocs.io/en/latest |
Cytoscape (version: 3.8.0) |
https://cytoscape.org |
https://cytoscape.org |