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. 2021 Dec 13;25(1):103627. doi: 10.1016/j.isci.2021.103627
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Rabbit anti-LECT1 (Cnmd) Thermo Fisher Scientific Cat# PA5-76974; RRID: AB_2720701
Rabbit anti-Cyp17a1 Abcam Cat# ab134910
Rabbit anti-DHT Mybiosource Cat# MBS2042442
Rabbit anti-Ddx4/Mvh Abcam Cat# ab13840; RRID: AB_443012
Rabbit anti-Gdf9 Abcam Cat# ab254323
Mouse anti-Stc1 Santa Cruz Biotechnology Cat# sc-293435
Mouse anti-Lhcgr Novus Cat# NBP2-52504; RRID: AB_2783817
Mouse anti-Marcks Santa Cruz Biotechnology Cat# sc-100777; RRID: AB_1125958
Mouse anti-Prkar2b Santa Cruz Biotechnology Cat# sc-376778
Goat anti-Mouse IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 488 Thermo Fisher Scientific Cat# A-11029; RRID: AB_2534088
Goat anti-Rabbit IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 555 Thermo Fisher Scientific Cat# A-21429; RRID: AB_2535850

Biological samples

Mouse ovarian tissue This study N/A

Chemicals, peptides, and recombinant proteins

M2 medium Sigma-Aldrich Cat# M7167
Penicillin-Streptomycin GIBCO Cat# 15140122
Collagenase, Type IV GIBCO Cat# 17104019
TrypLE Express Enzyme (1×) GIBCO Cat# 12604039
PMSG, Pregnant Mare Serum Gonadotropin Solarbio Cat# P9970
hCG, Human Chorionic Gonadotrophin SANMA N/A
α-MEM GIBCO Cat# 12561056
FBS, Fetal Bovine Serum VisTech Cat# SE200-ES
Insulin-Transferrin-Selenium (ITS -G) (100×) GIBCO Cat# 41400045
Nucleosides (100×) Sigma-Aldrich Cat# ES-008-D
Paraformaldehyde Sigma-Aldrich Cat# P6148
Sucrose Sigma-Aldrich Cat# V900116
Recombinant RNase Inhibitor TaKaRa Cat# 2313B
KAPA HiFi HotStart ReadyMix Roche Cat# 7958935001
Ampure XP beads Beckman Coulter Cat# A63882
dNTP mix Thermo Fisher Scientific Cat# R0192
Dynabeads M-280 Streptavidin Thermo Fisher Scientific Cat# 11206D
Tissue freezing medium (OCT medium) Leica Cat# 14020108926
Goat serum GIBCO Cat# 16210064
PrimeScript RT Master Mix (Perfect Real Time) TaKaRa Cat# RR036A
2× SYBR Green PCR Master Mix Bimake Cat# B21202
Dihydrotestosterone, DHT Solarbio Cat# ID0310
Enzalutamide (MDV3100) Selleckchem Cat# S1250
Testosterone Solarbio Cat# IT0110
PEG-400 KESHI Cat# 25322-68-22
Tween-80 Solarbio Cat# T8360
Triton X-100 Sigma-Aldrich Cat# T9284
ProLong Gold Antifade Mountant with DAPI Thermo Fisher Scientific Cat# P36935

Critical commercial assays

Quick-RNA Microprep Kit Zymo Research Cat# R1051
DNA Clean & Concentrator-5 (Capped) Zymo Research Cat# D4014
NEBNext Ultra II DNA Library Prep Kit for Illumina New England Biolabs Cat# E764

Deposited data

Raw data files and processed data files for ovarian single-cell RNA-seq This study GEO: GSE142587

Experimental models: Organisms/strains

Mouse: C57BL/6J Vital River N/A
Mouse: BKS-Leprem2Cd479/Gpt GemPharmatech Cat# T002407
Mouse: B6/JGpt-Lepem1Cd25/Gpt GemPharmatech Cat# T001461

Oligonucleotides

qPCR primers, see also Table S7 This paper N/A

Software and algorithms

ImageJ (version: 1.5.3.c) NIH https://imagej.nih.gov/ij/
ZEN Zeiss http://www.zeiss.com/microscopy/us/products/microscope-software/zen.html/
Cutadapt (version: 2.3) Read the Docs https://cutadapt.readthedocs.io/en/stable/
STAR (version: 2.6.0a) Github https://github.com/alexdobin/STAR
HTSeq (version: 0.11.2) Read the Docs https://htseq.readthedocs.io/en/master/history.html#version-0-11-2
Scater (version: 1.14.6) Bioconductor http://bioconductor.org/packages/release/bioc/html/scater.html
Seurat (version: 3.2.0) Satija Lab https://satijalab.org/seurat/
SCTransform (version: 0.2.1) Satija Lab https://satijalab.org/seurat/
clusterProfiler (version: 3.14.3) Bioconductor https://bioconductor.org/packages/release/bioc/html/clusterProfiler.html
GSVA (version: 1.34.0) Bioconductor https://bioconductor.org/packages/release/bioc/html/GSVA.html
Monocle 2 (version: 2.14.0) Bioconductor http://cole-trapnell-lab.github.io/monocle-release
CellPhoneDB (version: 2.14.0) Github https://github.com/Teichlab/cellphonedb
pySCENIC (version: 0.10.3) Van de Sande et al. (2020) https://pyscenic.readthedocs.io/en/latest
Cytoscape (version: 3.8.0) https://cytoscape.org https://cytoscape.org