KEY RESOURCES TABLE
| REAGENT or RESOURCE | SOURCE | IDENTIFIER |
|---|---|---|
| Antibodies | ||
| Anti-Green Fluorescent Protein | Aves Labs Inc | Part No. GFP-1020; RRID: AB_2307313 |
| Goat anti-Chicken IgY (H+L) Secondary Antibody, Alexa Fluor 568 | ThermoFisher Scientific | Part No. A-11041; RRID: AB_2534098 |
| DAPI | ThermoFisher Scientific | Part No. D1306; RRID: AB_2629482 |
| Fluoromount-G | SouthernBiotech | Part No. 0100-01 |
| Bacterial and Virus Strains | ||
| rAAV5-CaMKII-hChR2(H134R)-EYFP | University of North Carolina vector core | Lot AV4316LM |
| rAAV5-hSyn-eNpHR3.0-mCherry-WPRE | University of North Carolina vector core | Lot AV4834B |
| Chemicals, Peptides, and Recombinant Proteins | ||
| Bicuculline Methiodide | Sigma-Aldrich | Part No. 14343 |
| Lidocaine Hydrochloride | Fresenius Kabi | Part No. 491507 |
| Feraheme | AMAG Pharmaceuticals | NDC Code 59338-775-01, 59338-775-10 |
| Experimental Models: Organisms/Strains | ||
| Sprague-Dawley | Charles River | Strain Code #001; RRID:RGD_734476 |
| Software and Algorithms | ||
| SPM12 | Ashburner et al., 2014 | RRID:SCR_007037 |
| NiftyReg | Modat et al., 2010 Modat et al., 2014 | RRID:SCR_006593 |
| Matlab | MathWorks | RRID:SCR_001622 |
| OpenEphys Data Collection System | Siegle et al., 2017 | http://www.open-ephys.org/gui |
| OmniPlex Neural Recording Data Acquisition System | Plexon | https://plexon.com/products/omniplex-software/ |
| Wave_Clus | Quiroga et al., 2004 | https://github.com/csn-le/wave_clus |
| Other | ||
| 7T Preclinical MRI Scanner | Bruker | BioSpec series; Stanford Center for Innovation in In-Vivo Imaging |
| Fiber-optic Implant | Duffy et al., 2015 Thorlabs, Inc. | Part No. FT200EMT |
| Clearfil AP-X Dental Cement | Kuraray Noritake Dental Inc. | Part No. 1721-KA |
| Electrode Array | NeuroNexus | Part No. 1×16-10mm-100-177 |
| 10 uL NanoFil Syringe | World Precision Instruments | Part No. NANOFIL |
| Infusion cannula | A-M Systems | Part No. 800700 |
| Digital Brain Atlas | Paxinos and Watson, 2006 | N/A |