Skip to main content
. 2022 Jan 3;20:3. doi: 10.1186/s12967-021-03205-6

Table 2.

Association of 20 vitamin D genetic variants in MS GWAS dataset

SNP Serum 25OHD GWAS MS GWAS
EA NEA EAF Beta SE p val
rs8063565 C G 0.733 − 0.002 0.019 0.928
rs11542462 A G 0.130 0.026 0.025 0.292
rs964184 C G 0.134 − 0.014 0.024 0.570
rs1260326 C T 0.601 0.005 0.017 0.749
rs1800588 T C 0.219 − 0.005 0.020 0.786
rs10908469 C A 0.278 − 0.021 0.018 0.262
rs1532085 G A 0.607 − 0.006 0.017 0.717
rs2131925 G T 0.318 0.005 0.020 0.805
rs7528419 A G 0.784 0.025 0.020 0.225
rs804281 G A 0.576 0.028 0.017 0.098
rs532436 A G 0.210 0.042 0.020 0.034
rs10822145 T C 0.472 − 0.014 0.016 0.398
rs1660818 A G 0.317 0.000 0.018 0.999
rs2276360 C G 0.785 − 0.105 0.018 0.000
rs12317268 G A 0.162 0.037 0.022 0.084
rs11182428 C T 0.514 0.017 0.017 0.302
rs61003750 C G 0.300 0.029 0.018 0.122
rs142158911 A G 0.120 − 0.071 0.026 0.006
rs62115743 T C 0.077 − 0.056 0.031 0.071
rs1841850 C A 0.114 − 0.051 0.025 0.040

SNP single-nucleotide polymorphism, EA effect allele, NEA non-effect allele, EAF effect allele frequency; Beta is the regression coefficient based on the vitamin D raising effect allele, SE standard error