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. 2022 Jan 3;54:1. doi: 10.1186/s12711-021-00692-5

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© The Author(s) 2021

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 4 — Manhattan plots for the GWAS of phenotypic variability of litter size based on a LnVarTNB, and b varTNB. The y-axis shows the − log₁₀(p-values) of single SNP association with LnVarTNB or varTNB in Large White pigs, and the x-axis shows the physical position of the SNP in the SSC7 vQTL region. Linkage disequilibrium (LD) is given on a scale of 0–1 as a measure of the pairwise correlation between the most significant SNP (pink dot) and all other SNPs