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. 2021 Dec 22;9:791221. doi: 10.3389/fcell.2021.791221

TABLE 2.

List of 30 genes with significant changes in m6A and mRNA transcript abundance in bovine testes.

Gene Symbol Pattern m6A level change mRNA level change
Chr Peak start Peak end diff.FC diff.p log2(FC) Qvalue
ENSBTAG00000007860 ASPM Hypo_Down 16 76,041,095 76,041,295 −2.340 0.010 −3.237 0.000
ENSBTAG00000007284 CCNA1 Hypo_Down 12 25,110,778 25,110,878 −2.405 0.000 −5.692 0.000
ENSBTAG00000017048 CENPJ Hypo_Down 12 36,496,130 36,496,355 −4.685 0.000 −2.497 0.000
ENSBTAG00000016547 CEP57 Hypo_Down 15 14,448,587 14,448,637 −4.879 0.000 −3.235 0.000
ENSBTAG00000021769 CUL3 Hypo_Down 2 112,587,000 112,587,325 −3.625 0.000 −3.316 0.000
ENSBTAG00000014711 DBF4 Hypo_Down 4 32,288,748 32,288,948 −2.824 0.007 −3.584 0.000
ENSBTAG00000015541 DLC1 Hypo-Up 27 23,915,744 23,915,994 −2.733 0.000 2.021 0.000
ENSBTAG00000010069 EGR1 Hypo-Up 7 49,829,976 49,830,126 −2.566 0.007 2.527 0.000
ENSBTAG00000004953 ELK4 Hypo_Down 16 3,375,597 3,375,847 −2.808 0.000 −2.929 0.000
ENSBTAG00000015981 ETV1 Hypo_Down 4 22,100,027 22,100,077 −2.966 0.011 −2.703 0.000
ENSBTAG00000000569 HES1 Hypo-Up 1 73,362,983 73,363,058 −2.642 0.000 2.518 0.000
ENSBTAG00000010859 HYLS1 Hypo_Down 29 29,255,406 29,255,531 −3.612 0.000 −2.760 0.000
ENSBTAG00000021187 ID2 Hypo-Up 11 88,605,254 88,605,404 −2.933 0.005 2.841 0.000
ENSBTAG00000046561 LCORL Hypo_Down 6 37,403,775 37,403,825 −6.199 0.001 −2.257 0.000
ENSBTAG00000006844 LEF1 Hyper-Down 6 17,083,863 17,084,113 3.340 0.000 −3.079 0.000
ENSBTAG00000007678 MKX Hypo_Down 13 36,892,590 36,892,815 −2.628 0.017 −4.774 0.000
ENSBTAG00000003650 NR4A2 Hypo_Down 2 39,905,150 39,905,250 −3.755 0.001 −2.485 0.000
ENSBTAG00000014981 OTUB2 Hypo_Down 21 58,656,844 58,657,069 −4.620 0.000 −4.883 0.000
ENSBTAG00000014153 PKNOX1 Hypo_Down 1 143,202,058 143,202,108 −2.699 0.000 −2.689 0.000
ENSBTAG00000039552 PLK4 Hypo_Down 17 29,786,990 29,787,090 −6.151 0.000 −3.003 0.000
ENSBTAG00000020192 PPP2R5C Hypo_Down 21 66,815,607 66,815,782 −2.345 0.000 −3.238 0.000
ENSBTAG00000020262 PSME4 Hypo_Down 11 36,573,366 36,573,416 −2.082 0.028 −3.020 0.000
ENSBTAG00000009498 PTEN Hypo_Down 26 9,564,008 9,564,180 −3.981 0.000 −2.243 0.000
ENSBTAG00000014349 RNF126 Hypo_Down 7 43,262,899 43,262,949 −2.777 0.000 −2.273 0.000
ENSBTAG00000034531 RNF146B Hypo_Down 9 24,002,245 24,002,445 −2.178 0.000 −2.044 0.000
ENSBTAG00000017155 TRIM32 Hypo_Down 8 105,886,129 105,886,329 −2.293 0.000 −2.669 0.000
ENSBTAG00000001499 TRIM33 Hypo_Down 3 28,977,136 28,977,286 −2.836 0.000 −2.356 0.000
ENSBTAG00000020451 USP1 Hypo_Down 3 83,118,601 83,118,801 −2.842 0.000 −2.755 0.000
ENSBTAG00000030453 ZC3H14 Hypo_Down 10 100,267,705 100,267,930 −3.124 0.000 −2.682 0.000
ENSBTAG00000033268 ZFHX4 Hypo_Down 14 40,040,613 40,040,713 −2.826 0.012 −2.833 0.000

Chr indicates the chromosome of cattle; diff.FC represents the differential log2 fold change estimates; diff.p indicates the differential p-values; FC represents Fold changes. All the data in diff.p and qvalue part are rounded.