Table 1.
New public hubs, 2020–2021
Track Hub Name | Provider | Assemblies |
---|---|---|
ALFA (Allele Frequency Aggregator) | NCBI, dbGaP | hg19, hg38 |
Digital genomic footprinting | Altius Institute (Jeff Vierstra) | hg38 |
ENCODE DNA, RNA, and Integrative cCRE Hubs | UMass Medical School (Zhiping Weng) | hg19, hg38, mm10 |
Exp/Meth VNTR | Icahn School of Medicine at Mount Sinai (Andrew Sharp) | hg19, hg38 |
GENCODE Updates | GENCODE | hg38, mm10, mm39 |
Genome Archive (GenArk) | NCBI/VGP | 1,331 assemblies |
PhyloCSF++ | Johns Hopkins University (Steven Salzberg and Christopher Pockrandt) and the Seoul National University (Martin Steinegger) | rn6, fr3, gasAcu1, tarSyr2, sacCer3 |
T-cell ChIP and ATAC seq | Scripps Research (Matthew Pipkin) | mm10 |
UniBind 2021 | University of Oslo (Rafael Riudavets Puig) | hg38, mm10, ce11, dm6, danRer11, sacCer3, rn6, araTha1 |