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. 2021 Nov 17;50(D1):D1541–D1552. doi: 10.1093/nar/gkab1026

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© The Author(s) 2021. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 1. — The architecture of ProteomicsDB. The data content and data layer of ProteomicsDB are accessible via three application programming interfaces (APIs). The API4UI is used by the frontend and contains predefined requests to the data in ProteomicsDB for the purpose of data visualization. The novel vue-based visualization layer of ProteomicsDB (top left) is separated into three levels. The proteomicsdb-components package is agnostic toward ProteomicsDB and thus usable on any website. The package proteomicsdb-wrappers connects the components with ProteomicsDB and can be re-used on any website as well. The package proteomicsdb-view contains the entire vue-based frontend of ProteomicsDB. The APIv1.1 is used by external resources (top right) and will remain publicly available. The new APIv2.0 provides access to virtually any datasets stored in ProteomicsDB.