Table 2.
Comparison of tsRFun with existing tsRNA databases
| Databases/ webserver | tRFdb | tRF2Cancer | MINTbase 2.0 | tRFexplorer | tsRBase | tRFtarget | tRFTar | tsRFun |
|---|---|---|---|---|---|---|---|---|
| Year of Establishment | 2015 | 2016 | 2018 | 2019 | 2020 | 2020 | 2020 | 2021 |
| Comprehensive tsRNA Expression Profilings | No | No | No | No | No | No | No | Yes |
| tsRNA Targets and Functions Predictions | No | No | No | No | Yes | Yes | Yes | Yes |
| tsRNA Prognostic Value Analysis | No | No | No | No | No | No | No | Yes |
| tsRNA,miRNA, mRNANetwork | No | No | No | No | No | No | No | Yes |
| Number of Dataset Sample | ∼500 | ∼10 000 | Over 10 000 | Over 10 000 | Over 10 000 | ∼10 000 | ∼500 | Over 10 000 |
| Types of Datasets | Small-RNA seq | Small-RNA seq | Small-RNA seq | Small-RNA seq | Small RNA-Seq, CLASH, and CLEAR | CLASH | CLASH and CLEAR | Small RNA-Seq, CLASH, CLEAR and CLIP-Seq |
| Number of tsRNA Classes | 3 | 4 | 5 | 5 | 6 | 3 | 5 | 6 |
| Online Analysis Tools | No | Yes | No | No | No | No | No | Yes |