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. 2021 Nov 9;50(D1):D1358–D1367. doi: 10.1093/nar/gkab994

Table 1.

A summary of the Pi database contents (the discovery mode; on 15 August, 2021).

Genomic predictor Annotation predictor Benchmarking (AUC)
Code Number of targetsa nGene cGene eGene Number of seed (core) genesb dGene pGene fGene Number of crosstalk genesc Pi Naïved GAe EXf TMg Name
AA 15 195 33 42 174 229 30 16 19 43 - - - - - Alopecia areata
AAV 15 167 15 29 10 47 12 7 7 44 - - - - - ANCA-associated vasculitis
ALG 15 194 62 112 49 168 34 10 20 36 0.882 0.714 0.574 - 0.853 Allergy
AS 15 409 410 682 85 1035 173 72 93 34 0.818 0.779 0.598 0.500 0.782 Ankylosing spondylitis
ASM 15 246 125 206 96 359 66 24 41 46 0.918 0.760 0.591 0.523 0.839 Asthma
ATD 15 292 134 186 243 458 82 31 47 40 - - - - - Autoimmune thyroid disease
BD 15 174 21 55 20 83 27 7 17 47 - - - - - Behcet’s disease
CEL 15 286 150 280 177 521 106 43 55 35 - - - - - Celiac disease
CRO 15 512 548 994 276 1482 230 96 108 35 0.920 0.628 0.537 0.539 0.795 Crohn’s disease
GD 15 217 57 106 58 175 38 15 27 37 - - - - - Graves’ disease
Gt 15 173 42 36 24 83 7 4 4 41 0.794 0.741 0.586 - 0.766 Gout
JIA 15 235 91 178 81 306 67 30 30 36 0.910 0.747 0.550 0.724 0.972 Juvenile idiopathic arthritis
MS 15 360 263 566 187 830 111 63 58 35 0.891 0.699 0.517 0.509 0.761 Multiple sclerosis
OA 15 165 19 33 3 45 2 2 3 36 0.718 0.666 0.506 0.570 0.806 Osteoarthritis
PBC 15 264 134 229 153 432 74 36 38 36 0.558 0.667 0.527 - 0.570 Primary biliary cholangitis
PSO 15 511 588 901 132 1379 220 91 118 33 0.916 0.651 0.584 0.531 0.773 Psoriasis
RA 15 432 214 392 571 1014 154 66 70 33 0.913 0.688 0.603 0.578 0.848 Rheumatoid arthritis
SAR 15 310 221 177 90 338 45 20 37 40 0.875 0.681 0.545 0.510 0.869 Sarcoidosis
SLE 15 397 318 592 174 902 140 50 68 40 0.939 0.629 0.611 0.521 0.916 Systemic lupus erythematosus
SSC 15 189 39 81 64 143 32 17 20 36 0.783 0.699 0.535 - 0.954 Systemic scleroderma
T1D 15 364 246 368 292 761 117 53 70 50 0.818 0.692 0.537 0.504 0.866 Type I Diabetes
UC 15 508 501 885 246 1365 208 92 106 33 0.914 0.741 0.567 0.619 0.801 Ulcerative colitis
IGE 15 164 23 38 18 63 20 7 15 36 - - - - - IgE and allergic sensitization
IIM 15 220 80 78 37 144 34 8 23 33 - - - - - Idiopathic inflammatory myopathies
KD 15 169 27 44 26 79 21 6 8 34 - - - - - Kawasaki disease
MG 15 179 16 34 21 63 23 3 15 35 - - - - - Myasthenia gravis
NAR 15 173 29 27 9 60 13 8 10 36 - - - - - Narcolepsy
PSC 15 422 433 705 340 1122 196 78 111 33 - - - - - Primary sclerosing cholangitis
SJO 15 199 44 64 38 119 28 10 14 33 - - - - - Sjogren’s syndrome
VIT 15 361 171 227 470 772 99 52 54 34 - - - - - Vitiligo

aThe total number of target genes prioritized.

bThe total number of genomic seed genes.

cThe total number of pathway crosstalk genes.

dAn approach prioritizing a gene by how often it has been targeted by existing approved drugs.

ePrioritization based on individual evidence from Genetic Associations (Open Targets).

fPrioritization based on individual evidence from gene EXpression (Open Targets).

gPrioritization based on individual evidence from Text Mining (Open Targets).