Table 2.
Contents of m5C-Atlas database
Species | Site number (mRNA) | Cell line/tissue | condition/treatment | Quantitative profiles | Basic annotation | Disease association | Conservation in vertebrates |
---|---|---|---|---|---|---|---|
Homo sapiens | 124 105 | 22 | 91 | Yes | Yes | Yes | Yes |
Mus musculus | 16 279 | 17 | 13 | Yes | Yes | Yes | Yes |
Danio rerio | 7846 | 1 | 7 | Yes | Yes | Yes | Yes |
Drosophila melanogaster | 5421 | 2 | 3 | Yes | Yes | Yes | - |
Arabidopsis thaliana | 684 | 6 | 22 | Yes | Yes | Yes | - |
Saccharomyces cerevisiae | 1539 | 1 | 2 | Yes | Yes | - | - |
Brassica rapa | 21 | 1 | 2 | Yes | Yes | - | - |
Caenorhabditis elegans | 4 | 1 | 1 | Yes | Yes | - | - |
Ginkgo biloba | 5 | 1 | 2 | Yes | Yes | - | - |
Murine leukemia virus | 5 | 1 | 1 | Yes | Yes | - | - |
Triticum turgidum subsp | 17 | 1 | 2 | Yes | Yes | - | - |
Nannochloropsis oculata | 39 | 1 | 2 | - | - | - | - |
Human immunodeficiency virus | 31 | 2 | 1 | - | - | - | - |