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. 2022 Jan 5;17(1):e0261714. doi: 10.1371/journal.pone.0261714

Table 3. Primers used in the functional gene abundance qPCR assay.

Gene Forward Sequence Reverse Sequence Product size (bp) Efficiency Reference
16s rRNA 5’-TAA CCT GGG AAC GCG ATT T-3’ 5’- CCA CTA CCC TCT ACC ACA CT-3’ 55 111% [37]
nosZ 5’- AGA ACG ACC AGC TGA TCG ACA-3” 5’- TCC ATG GTG ACG CCG TGG TTG-3’ 300 101% [38]
mcrA 5’- AAA GTG CGG AGC AAT CAC C-3’ 5’TCG TCC CAT TCC TGC TGC ATT GC-3’ 186 87% [39]
nirK 5’-TCA TGG TGC CGC GGA CGG-3’ 5- GAA CTT GCC GGT GCC CAG AC-3’ 326 88% [40]
amoA 5’- GGG GTT TCT ACT GGT GGT-3’ 5-‘ CCC CTC BGS AAA VCC TTC TTC-3’ 491 81% [41]