Table 1:

Quality metrics for genome assemblies and gene model annotations. Darker shading indicates higher quality. The NAM lines are shaded based on their primary grouping (gold = stiff stalk heterotic group, blue = non-stiff-stalk heterotic group, gray = mixed tropical-temperate ancestry, purple = popcorn, orange = sweet corn, green = tropical).

^*Hp301 and P39 have the lowest amounts of TR-1 and subtelomere repeats, respectively. Our methods can overestimate assembly when repeats are in low abundance (17).