Table 2.

Summary of assembled gene functions of Handeliodendron bodinieri and Eurycorymbus cavaleriei chloroplast genomes

Gene Family	Gene Names
Subunits of ATP synthase	atpA, atpB, atpE, atpF*, atpH, atpI
Subunits of NADH dehydrogenase	ndhA*, ndhB*(×2), ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK
Subunits of cytochrome	petA, petB*, petD*, petG, petL, petN
Subunits of photosystem I	psaA, psaB, psaC, psaI, psaJ
Subunits of photosystem II	psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ
Subunit of rubisco	rbcL
Subunit of Acetyl-CoA-carboxylase	accD
c-type cytochrome synthesis gene	ccsA
Envelop membrane protein	cemA
Protease	clpP**
Translational initiation	ψinfA
Maturase	matK
Large subunit of ribosome	rpl2*(×2), rpl14, rpl16*, rpl20, rpl22H, rpl23(× 2), rp32, rpl33, rpl36
DNA dependent RNA polymerase	rpoA, rpoB, rpoC1*, rpoC2
Small subunit of ribosome	rps2H, rps3, rps4, rps7(×2), rps8, rps11, rps12**(× 2), rps14, rps15, rps16*, rps18, rps19(×E)
rRNA Genes	rrn4.5(×2), rrn5(× 2), rrn16(× 2), rrn23(× 2)
tRNA Genes	trnA-UGC(× 2), trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnfM-CAU, trnG-GCC, trnG-UCC, trnH-GUG, trnI-CAU(× 2), trnI-GAU(× 2), trnK-UUU, trnL-CAA(× 2), trnL-UAA, trnL-UAG, trnM-CAU, trnN-GUU(× 2), trnP-UGG, trnQ-UUG, trnR-ACG(× 2), trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT-GGU, trnT-UGU, trnV-GAC(× 2), trnV-UAC, trnW-CCA, trnY-GUA
Unknown function	ycf1, ycf2(× 2), ycf3**, ycf4, ycf15(× 2)

^* Genes containing a single intron; ** Genes containing two introns; (× 2) Genes are located within the IR regions and therefore are duplicated; (×E) Genes present as two copies in the IR regions of E. cavaleriei; ψ indicates a pseudogene; ^H Pseudogene in H. bodinieri only