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. 2021 Dec 15;10:e66955. doi: 10.7554/eLife.66955
Parameter Description Value
Common
fO,C Binding rate of CHE-1 on che-1 promoter 0.03 s–1
fO Binding rate of CHE-1 on target gene promoters 0.03 s–1
fO,H Binding rate of HD-TF on che-1 promoter 0.03 s–1
bO Unbinding rate of CHE-1 and HD-TF from promoter 100 s–1
fM che-1 mRNA production rate 0.0085 s–1
bM che-1 mRNA degradation rate 0.00083 s–1
fC CHE-1 protein production rate 0.0198 s–1
bC CHE-1 protein degradation rate 0.00032 s–1
fM,0 CHE-1 independent che-1 mRNA production rate 0.005 s–1
Model 1
bO,s Slow unbinding rate of CHE-1/HD-TF from complex on promoter 0.1 s–1
Model 2
fM che-1 mRNA production rate upon induction by CHE-1 0.01 s–1
fM,H che-1 mRNA production rate upon induction by HD-TF 0.015 s–1
Models 1B, 2B
fH HD-TF protein production rate 0.0001 s–1
bH HD-TF protein degradation rate 0.000015 s–1