(A and B) Immunofluorescent detection of early endosomes (EEA1, red) (A) and late endosomes (RAB7, red) (B) in ATXN3-depleted ARPE-19 cells after incubation with fluorescent latex beads (green) to induce phagocytosis. Quantification of the percentage of the beads within these vesicles shows a significant increase of early endosomes and a decrease of late endosomes. Mann-Whitney test (*p < 0.05, ***p < 0.001, n > 15 cells per group).
(C) Knockdown of ATXN3 in ARPE-19 phagocytic cells alters cytoskeleton organization, as shown by microtubule disorganization (α-tubulin, green), dynein-2 disarray (red), and F-actin increase (phalloidin, gray).
(D) Zoom-in at the central region of images in (C). White arrows point to dynein-2 dots trailing microtubule filaments in control cells (3D visualization in Videos S5 and S6). Nuclei were labeled with DAPI (blue). Scale bar in (A)–(C),10 μm.