Table 2.
Gene expression in KRT9L3 + versus KRT9LC2 + cells: Genes upregulated in KRT9L3 + keratinocytes (interscale epidermis).
| Rank | Gene symbol | Gene name | P-value (adjusted) | Average Log(e) FC | Percentage (KRT9L3 + cells) | Percentage (KRT9LC2 + cells) |
|---|---|---|---|---|---|---|
| 1 | KRT9L3 | Keratin 9-like 3 | 1.50E−129 | 1.76 | 100 | 46 |
| 2 | ENSGALG00000007127 | Fatty acid desaturase 1 (FADS1) | 5.13E−38 | 0.69 | 57 | 12 |
| 3 | CBP63-K | Corneous beta-protein 63 keratinocyte type | 1.89E−34 | 2.47 | 63 | 26 |
| 4 | ENSGALG00000045042 | D-beta-hydroxybutyrate dehydrogenase, mito.-like | 4.14E−33 | 0.64 | 63 | 22 |
| 5 | CBP62-K | Corneous beta-protein 62 keratinocyte type | 8.51E−29 | 2.02 | 52 | 16 |
| 6 | GAPDH | Glyceraldehyde-3-phosphate dehydrogenase | 4.79E−27 | 0.48 | 95 | 82 |
| 7 | KRT9L4 | Keratin 9-like 4 | 9.55E−27 | 1.08 | 40 | 6 |
| 8 | LGALS1 | Galectin 1 | 2.21E−26 | 0.46 | 100 | 99 |
| 9 | PRDX1 | Peroxiredoxin 1 | 4.20E−26 | 0.54 | 58 | 21 |
| 10 | S100A6 | S100 calcium binding protein A6 | 5.43E−24 | 0.60 | 97 | 88 |
| 11 | GPX1 | Glutathione peroxidase 1 | 5.47E−24 | 0.38 | 100 | 94 |
| 12 | IL13RA2 | Interleukin 13 receptor subunit alpha 2 | 1.01E−20 | 0.28 | 28 | 1 |
| 13 | SCCPDH | Saccharopine dehydrogenase (putative) | 2.76E−20 | 0.43 | 53 | 21 |
| 14 | ENSGALG00000021451 | Uncharacterized oxidoreductase-like | 4.21E−20 | 0.39 | 58 | 25 |
| 15 | ENSGALG00000045989 | Trypsin II-P29-like, lincRNA | 5.95E−19 | 0.41 | 49 | 18 |
| 16 | S100A11 | S100 calcium binding protein A11 | 2.50E−18 | 0.40 | 91 | 81 |
| 17 | ENSGALG00000007220 | Ferritin heavy chain 1 | 1.84E−17 | 0.41 | 56 | 23 |
| 18 | ST13 | ST13 Hsp70 interacting protein | 8.37E−16 | 0.29 | 45 | 15 |
| 19 | ACAT2 | Acetyl-CoA acetyltransferase 2 | 9.12E−14 | 0.29 | 35 | 10 |
| 20 | BARX2B | BARX homeobox 2B | 1.42E−13 | 0.25 | 20 | 1 |
| 21 | YBX1 | Y-box binding protein 1 | 1.84E−13 | 0.35 | 86 | 62 |
| 22 | PPA1 | Inorganic pyrophosphatase 1 | 6.03E−12 | 0.22 | 30 | 7 |
| 23 | MOGAT1 | Monoacylglycerol O-acyltransferase 1 | 5.43E−11 | 0.19 | 19 | 2 |
| 24 | OLAH | Oleoyl-ACP hydrolase | 7.13E−11 | 0.18 | 19 | 1 |
| 25 | ATP5G3 | ATP synthase, mitochondrial F0 complex, subunit C3 | 3.76E−10 | 0.37 | 60 | 38 |
| 26 | ANXA1 | Annexin A1 | 4.20E−10 | 0.34 | 46 | 20 |
| 27 | NAP1L1 | Nucleosome assembly protein 1 like 1 | 4.79E−10 | 0.26 | 52 | 26 |
| 28 | TKT | Transketolase | 9.13E−10 | 0.21 | 31 | 10 |
| 29 | DUSP14 | Dual specificity phosphatase 14 | 1.55E−09 | 0.27 | 41 | 18 |
| 30 | EDQM2-EDC | Epidermal differentiation protein Q motif 2, EDC | 1.61E−09 | 0.39 | 35 | 12 |
| 31 | ENSGALG00000045170 | Lymphocyte antigen 6E-like | 2.82E−09 | 0.31 | 20 | 3 |
| 32 | CHCHD2 | Coiled-coil-helix-coiled-coil-helix domain containing 2 | 3.27E−09 | 0.31 | 76 | 62 |
| 33 | FDPS | Farnesyl diphosphate synthase | 5.30E−09 | 0.45 | 40 | 18 |
| 34 | ENSGALG00000006723 | Isopentenyl-diphosphate delta isomerase 1 | 5.48E−09 | 0.28 | 34 | 13 |
| 35 | IL20RA | Interleukin 20 receptor subunit alpha | 6.03E−09 | 0.16 | 19 | 3 |
| 36 | PPDPF | Pancreatic progenitor cell diff. proliferation factor | 6.45E−09 | 0.29 | 65 | 46 |
| 37 | ENSGALG00000008439 | CD36 | 9.64E−09 | 0.20 | 23 | 5 |
| 38 | HOMER2 | Homer scaffold protein 2 | 2.80E−08 | 0.19 | 28 | 8 |
| 39 | ACLY | ATP citrate lyase | 3.09E−08 | 0.26 | 38 | 17 |
| 40 | ATP5G1 | ATP synthase, H + transporting, mito. F0 compl. sub. C1 | 4.27E−08 | 0.29 | 57 | 35 |
| 41 | HACD3 | 3-hydroxyacyl-CoA dehydratase 3 | 5.08E−08 | 0.20 | 32 | 12 |
| 43 | EDQM1-EDC | Epidermal differentiation protein Q motif 1, EDC | 8.39E−08 | 0.47 | 39 | 18 |
| 45 | KRT9L1 | Keratin 9-like 1 | 1.14E−07 | 0.17 | 15 | 1 |
| 52 | HSD17B12 | Hydroxysteroid 17-beta dehydrogenase 12 | 4.27E−07 | 0.21 | 35 | 15 |
| 54 | ELOVL4 | ELOVL fatty acid elongase 4 | 6.89E−07 | 0.41 | 76 | 62 |
| 74 | FASN | Fatty acid synthase | 8.33E−05 | 0.17 | 26 | 10 |
| 75 | ENSGALG00000027494 | Serine palmitoyltransferase small subunit B (SPTSSB) | 1.05E−04 | 0.19 | 40 | 21 |
| 79 | LOR1-EDC | Loricrin 1, EDC | 2.53 E−04 | 0.17 | 10 | 1 |
| 80 | ENSGALG00000045194 | Lipase member M-like 2 | 2.53 E−04 | 0.10 | 10 | 1 |
| 92 | ENSGALG00000044962 | Arylacetamide deacetylase-like 4-like (AADAC4L) | 2.55E−03 | 0.21 | 21 | 8 |