Table 1.
Detected respiratory viruses, sample source and our explanation for diagnostic failure.
| Virus species | Virus family | KCH cohort | Household cohort | Grounds for diagnostic failure |
|---|---|---|---|---|
| HRV-A | Picornaviridae | 4 | 4 | Primer/probe mismatch |
| HRV-B | Picornaviridae | 3 | 4 | Primer/probe mismatch |
| HRV-C | Picornaviridae | 11 | 2 | Primer/probe mismatch |
| HMPV | Pneumoviridae | 4 | 2 | Primer/probe mismatch |
| RSVB | Pneumoviridae | 3 | 0 | Primer/probe mismatch |
| HPIV-1 | Paramyxoviridae | 0 | 1 | Primer/probe mismatch |
| DENV-2 | Flaviviridae | 1 | 0 | Not in panel |
| HHV-5 | Herpesviridae | 2 | 0 | Not in panel |
| HSV-1 | Herpesviridae | 2 | 0 | Not in panel |
| Bocavirus | Parvoviridae | 1 | 3 | Not in panel |
| Parvovirus B19 | Parvoviridae | 1 | 0 | Not in panel |
| Echovirus E1 | Picornaviridae | 0 | 1 | Not in panel |
| EV-D68 | Picornaviridae | 4 | 0 | Not in panel |
| CV-A16 | Picornaviridae | 1 | 0 | Not in panel |
| CV-A24 | Picornaviridae | 0 | 6 | Not in panel |
| Parechovirus | Picornaviridae | 0 | 1 | Not in panel |
| Poliovirus | Picornaviridae | 1 | 0 | Not in panel |
| Rubella | Matonaviridae | 2 | 0 | Not in panel |
| Total virus identified | 40 | 24 | ||