Table 3.
Silhoutte scores comparison of proposed method with other dimensionality reduction techniques.
| Dataset name | t-SNE | PCA | Isomap | Standard LLE | Eigenmaps | MLLE | MLLE+ICA |
|---|---|---|---|---|---|---|---|
| Baron_human1 | 0.244 | 0.364 | 0.498 | 0.524 | 0.839 | 0.908 | 0.904 |
| Baron_human2 | 0.231 | 0.428 | 0.543 | 0.614 | 0.823 | 0.906 | 0.905 |
| Baron_human3 | 0.243 | 0.377 | 0.522 | 0.467 | 0.826 | 0.990 | 0.976 |
| Baron_human4 | 0.239 | 0.424 | 0.614 | 0.538 | 0.896 | 0.910 | 0.912 |
| Baron_mouse1 | 0.231 | 0.400 | 0.422 | 0.448 | 0.472 | 0.881 | 0.917 |
| Baron_mouse2 | 0.221 | 0.414 | 0.530 | 0.684 | 0.779 | 0.941 | 0.943 |
| Muraro | 0.258 | 0.494 | 0.532 | 0.738 | 0.913 | 0.933 | 0.944 |
| Segerstolpe | 0.231 | 0.410 | 0.399 | 0.400 | 0.537 | 0.960 | 0.956 |
| Xin | 0.242 | 0.445 | 0.481 | 0.494 | 0.751 | 0.899 | 0.888 |
| Wang | 0.230 | 0.484 | 0.442 | 0.745 | 0.608 | 0.993 | 0.996 |
| H1299 scRNA-seq | 0.245 | 0.269 | 0.701 | 0.683 | 0.782 | 0.938 | 0.943 |
| Calu3 scRNA-seq | 0.361 | 0.232 | 0.494 | 0.452 | 0.798 | 0.889 | 0.924 |
| PBMC | 0.244 | 0.401 | 0.622 | 0.621 | 0.632 | 0.867 | 0.876 |
Significant values are in bold.