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Binding interaction plot of MonoProt-I protonated state of HCQ with a RdRp, b protease, and c spike proteins of SARS-CoV2, d structural variation of RdRp:HCQ complex during 100-ns simulation. RMSD of all-atom and backbone atoms for the protein (blue and orange), RMSD of HCQ when protein is taken for alignment (green line) and when ligand (HCQ) is taken as a reference molecule for alignment (red lines)
