Aβ	Amyloid beta
AD	Alzheimer’s disease
APOE-ε4	Apolipoprotein E ε4
APP	Amyloid precursor protein
BACE1	β-secretase
BBB	Blood–brain barrier
BECN1	Beclin 1
CCL	C–C motif chemokine ligand
cGAS	Cyclic guanosine monophosphate-adenosine monophosphate synthase
ChAc	Choline acetyltransferase
CNS	Central nervous system
CRMP	Collapsin response-mediated protein
CXCL	Chemokine (C–X–C motif) ligand
DAI	DNA-dependent activator of IFN-regulatory factor
DAMPs	Damage-associated molecular patterns
DCs	Dendritic cells
DRG	Dorsal root ganglia
ds	Double-stranded
FGFs	Fibroblast growth factors
g	Glycoprotein
GAD	Glutamine acid decarboxylase
GFAP	Glial fibrillary acidic protein
GRP78	Glucose-regulated protein 78
GSK-3β	Glycogen synthase kinase 3beta
HN	Human neural
HNE	4-hydroxy trans-2-nonenal
HSE	Herpes simplex encephalitis
HSV-1	Herpes simplex virus type 1
HVEM	Herpes virus entry mediator
ICP0	Infection cell protein 0
IE	Immediate early
IFI16	IFN-γ-inducible protein 16
IFNs	Interferons
ILK	Integrin-linked kinase
IRF	Interferon regulatory factor
iNOS	Inducible nitric oxide synthase
IP-10	IFN-γ-inducible protein 10
ISGs	IFN-stimulated genes
LATs	Latency-associated transcripts
MAPs	Microtubule-associated proteins
MAVS	Mitochondrial antiviral-signaling protein
MDA5	Melanoma differentiation-associated protein 5
miRNAs	MicroRNAs
MMP	Matrix metalloprotease
MVs	Microvesicles
NF-κB	Nuclear factor kappa B
NFTs	Neurofibrillary tangles
NK	Natural killer
OBCs	Organotypic brain culture slices
OPCs	Oligodendrocyte progenitor cells
PAMPs	Pathogen-associated molecular patterns
PKA	Protein kinase A
PKR	Protein kinase R
PRRs	Pattern recognition receptors
PSD-95	Postsynaptic density protein 95
PUFA	Polyunsaturated fatty acid
RCS	Reactive carbonyl species
RIG-I	Retinoic acid-inducible gene I
RNS	Reactive nitrogen species
ROS	Reactive oxygen species
sAβ	Soluble Aβ
snoRNAs	Small nucleolar RNAs
SOCS	Suppressor of cytokine signaling
STING	Stimulator of interferon gene
TG	Trigeminal ganglion
TH	Tyrosine hydroxylase
TLR	Toll-like receptor
TNFα	Tumor necrosis factor α
vhs	Virion host shutoff
8-OHA	8-hydroxyadenine
8-OHG	8-hydroxyguanine