Table 4.
Top predicted targets of miR-149-5p.
| Rget Gene | Representative Transcript | Gene Name | Number of 3P-seq Tags Supporting UTR + 5 | Conserved Sites | Poorly Conserved Sites | 6mer Sites | Cumulative Weighted Context++ Score | Total Context++ Score | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Total | 8mer | 7mer-m8 | 7mer-A1 | Total | 8mer | 7mer-m8 | 7mer-A1 | |||||||
| LRIG2 | ENST00000361127.5 | leucine-rich repeats and immunoglobulin-like domains 2 | 348 | 1 | 1 | 0 | 0 | 3 | 1 | 2 | 0 | 1 | −0.96 | −1.08 |
| STRADB | ENST00000392249.2 | STE20-related kinase adaptor beta | 12 | 1 | 0 | 1 | 0 | 1 | 1 | 0 | 0 | 1 | −0.87 | −0.87 |
| ZBTB37 | ENST00000367701.5 | zinc finger and BTB domain containing 37 | 213 | 0 | 0 | 0 | 0 | 5 | 0 | 1 | 4 | 4 | −0.83 | −0.92 |
| TTLL9 | ENST00000375921.2 | tubulin tyrosine ligase-like family, member 9 | 5 | 0 | 0 | 0 | 0 | 3 | 2 | 0 | 1 | 1 | −0.82 | −0.82 |
| FRMD7 | ENST00000370879.1 | FERM domain containing 7 | 5 | 0 | 0 | 0 | 0 | 2 | 1 | 1 | 0 | 0 | −0.81 | −0.81 |
| TSPAN31 | ENST00000547992.1 | tetraspanin 31 | 72 | 0 | 0 | 0 | 0 | 2 | 1 | 1 | 0 | 2 | −0.78 | −1.10 |
| CTRC | ENST00000375943.2 | chymotrypsin C (caldecrin) | 5 | 0 | 0 | 0 | 0 | 3 | 1 | 1 | 1 | 2 | −0.77 | −0.77 |
| STRA6 | ENST00000395105.4 | stimulated by retinoic acid 6 | 42 | 0 | 0 | 0 | 0 | 4 | 1 | 3 | 0 | 1 | −0.77 | −0.77 |
| GUCD1 | ENST00000447813.2 | guanylyl cyclase domain containing 1 | 2990 | 0 | 0 | 0 | 0 | 2 | 2 | 0 | 0 | 1 | −0.77 | −0.77 |
| KCNJ5 | ENST00000529694.1 | potassium inwardly-rectifying channel, subfamily J, member 5 | 12 | 0 | 0 | 0 | 0 | 4 | 0 | 4 | 0 | 2 | −0.75 | |