Table 1.
miR-539 and miR-582 target many genes in ECs and SMCs. Genes regulated by miR-539 and miR-582 in ECs and SMCs according to the data obtained by RNA sequencing. Data were compared with the lists of predicted target genes available on TargetScan and then analyzed with Gene Ontology to highlight the biological processes where identified target genes are involved.
GO ID | Biological Processes | Matched Genes in the Network | Genes in the Networks | False Discovery Rate |
---|---|---|---|---|
miR-539 in ECs | ||||
GO:0030336 | negative regulation of cell migration | 28 | 237 | 0.00093 |
GO:0008284 | positive regulation of cell population proliferation | 69 | 878 | 0.002 |
miR-582 in ECs | ||||
GO:0035295 | tube development | 59 | 793 | 1.37 × 105 |
GO:0008284 | positive regulation of cell population proliferation | 58 | 878 | 0.00035 |
GO:0001568 | blood vessel development | 44 | 464 | 1.49 × 106 |
GO:0001525 | angiogenesis | 30 | 297 | 4.72 × 105 |
miR-539 in SMCs | ||||
GO:0008285 | negative regulation of cell population proliferation | 18 | 669 | 0.0247 |
GO:0030334 | regulation of cell migration | 20 | 753 | 0.0194 |
GO:0045765 | regulation of angiogenesis | 14 | 277 | 0.0044 |
miR-582 in SMCs | ||||
GO:0008285 | negative regulation of cell population proliferation | 103 | 669 | 0.0016 |
GO:0030335 | positive regulation of cell migration | 81 | 452 | 0.00015 |
GO:1901342 | regulation of vasculature development | 58 | 305 | 0.00067 |