Table 6.
Use Case 1—Randomised dataset analysis.
Total | Converted | Processed | Positives | TP | FP | TN | FN | |
---|---|---|---|---|---|---|---|---|
DS-01 | ||||||||
GlySTreeM | 200 | 199 | 199 | 8 | 8 | 0 | 191 | 0 |
Glycowork | 200 | 152 | 146 | 8 | 8 | 0 | 138 | 0 |
DS-02 | ||||||||
GlySTreeM | 200 | 199 | 199 | 4 | 4 | 0 | 195 | 0 |
Glycowork | 200 | 152 | 146 | 4 | 4 | 0 | 142 | 0 |
DS-03 | ||||||||
GlySTreeM | 200 | 198 | 198 | 3 | 3 | 0 | 195 | 0 |
Glycowork | 200 | 141 | 135 | 2 | 1 | 0 | 133 | 1 |
DS-04 | ||||||||
GlySTreeM | 200 | 199 | 199 | 6 | 6 | 0 | 193 | 0 |
Glycowork | 200 | 136 | 131 | 6 | 6 | 0 | 125 | 0 |
DS-05 | ||||||||
GlySTreeM | 200 | 198 | 198 | 6 | 6 | 0 | 192 | 0 |
Glycowork | 200 | 135 | 130 | 6 | 6 | 0 | 124 | 0 |
1 Abbrev: DS, DataSet; TP, True Positives; FP, False Positives; TN, True Negatives; FN, False Negatives. 2 One of the true positives was not converted to IUPAC with GlycanFormatConverter so is not present in the dataset processed by GlycoWord. 3 GlycoWork false negative is structure ID 3529 in GlyConnect.