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. 2022 Jan 5;27(1):330. doi: 10.3390/molecules27010330

Table 1.

Structures, IC50 values, and the most important biological results of the reviewed pyrazole-based kinase inhibitors.

Kinase Inhibitor IC50 Value in
Cell-Free Assay (nM)
Other Biological Activities
AKT1 graphic file with name molecules-27-00330-i001.jpg 61 Antiproliferative activity against HCT116 and OVCAR-8 cell lines (IC50 = 7.76 and 9.76 µM, respectively)
graphic file with name molecules-27-00330-i002.jpg 1.3 Antiproliferative activity against HCT116 colon cancer cell line (IC50 = 0.95 µM).
Reduction of tumor size by 42% in the MM1S model.
ALK graphic file with name molecules-27-00330-i003.jpg 2.9 Reduction of phosphorylation of ALK in hippocampus in a dose-dependent manner at 30 mg/kg and higher.
Inhibited phosphorylation in prefrontal cortex at 100 mg/kg.
ASK1 graphic file with name molecules-27-00330-i004.jpg - Good CNS penetration.
Weak potency against hERG, CYP3A4, and CYP2C9.
Aurora Inline graphic
(Barasertib, AZD1152)
0.37 (Aurora B) Passed phase I clinical trials in Japanese and Western volunteers suffering from advanced acute myeloid leukemia.
graphic file with name molecules-27-00330-i006.jpg 160 (Aurora A) IC50 values against HCT116 colon cancer and MCF7 breast cancer cell lines are 0.39 and 0.46 µM, respectively.
graphic file with name molecules-27-00330-i007.jpg 28.9 (Aurora A)
2.2 (Aurora B)
IC50 values against U937 (leukemia), K562 (leukemia), A549 (lung), LoVo (colon), and HT29 (colon) cancer cell lines are 5.106, 5.003, 0.487, 0.789, and 0.381 µM, respectively.
graphic file with name molecules-27-00330-i008.jpg 35 (Aurora A)
75 (Aurora B)
Antiproliferative activity against SW620 and HCT116 colon cancer cell lines (IC50 = 0.35 and 0.34 µM, respectively).
graphic file with name molecules-27-00330-i009.jpg 0.316 (Aurora B) Antiproliferative activity against MDA-MB-468 with IC50 value equal to 107 nM.
BCR-ABL graphic file with name molecules-27-00330-i010.jpg 14.2 Antiproliferative activity against the K562 leukemia cell line with an IC50 value equal to 0.27 µM.
graphic file with name molecules-27-00330-i011.jpg 8.5 Antiproliferative activity against the K562 leukemia cell line with an IC50 value less than 2 nM.
graphic file with name molecules-27-00330-i012.jpg 0.5 IC50 = 25 nM against ABL (T315I).
Clinical candidate for CML.
Calcium-dependent kinase graphic file with name molecules-27-00330-i013.jpg 56 Anti-parasitic activity against Plasmodium falciparum with an IC50 value of 0.262 µM.
graphic file with name molecules-27-00330-i014.jpg 0.7 Anti-parasitic activity against Cryptosporidium parvum with an EC50 value of 0.41 µM.
graphic file with name molecules-27-00330-i015.jpg 2.5 Anti-parasitic activity against Cryptosporidium parvum with an EC50 value of 0.51 µM.
Checkpoint kinase 2 graphic file with name molecules-27-00330-i016.jpg 48.4 Antiproliferative activity against HepG2 (hepatocellular carcinoma), HeLa (cervical), and MCF7 (breast) cancer cell lines.
graphic file with name molecules-27-00330-i017.jpg 17.9 Antiproliferative activity against HepG2 (hepatocellular carcinoma), HeLa (cervical), and MCF7 (breast) cancer cell lines (IC50 = 10.8, 11.8, and 10.4 µM, respectively).
graphic file with name molecules-27-00330-i018.jpg 41.64 Modest potency against HepG2, HeLa, and MCF7 cell lines with 2-digit micromolar IC50 values.
Cyclin-dependent kinases graphic file with name molecules-27-00330-i019.jpg 420 (CDK4) Modest antiproliferative activity against K562, MCF7, and RPMI-8226 cancer cell lines.
Induced apoptosis in RPMI-8226 cells.
graphic file with name molecules-27-00330-i020.jpg - IC50 values against MCF7 cells (IC50 = 0.13 µM), MIAPaCa pancreatic cancer cell line (IC50 = 0.28 µM), and HeLa cervical cancer cell line (IC50 = 0.21 µM).
graphic file with name molecules-27-00330-i021.jpg - IC50 values against MCF7 cells (IC50 = 0.15 µM), MIAPaCa pancreatic cancer cell line (IC50 = 0.34 µM), and HeLa cervical cancer cell line (IC50 = 0 0.73 µM).
graphic file with name molecules-27-00330-i022.jpg 24 (CDK2)
23 (CDK5)
Induction of apoptosis in the MiaPaCa2 pancreatic cancer cell line.
graphic file with name molecules-27-00330-i023.jpg 10–210 (multiple CDK inhibitor) Induction of apoptosis in colon cancer and multiple myeloma cells.
graphic file with name molecules-27-00330-i024.jpg 2380 (CDK1) Antiproliferative activity against hepatocellular carcinoma (HepG2, Huh7, and SNU-475), colon cancer (HCT116), and renal cancer (UO-31) cell lines (IC50 = 0.05, 0.065, 1.93, 1.68, and 1.85 µM, respectively).
graphic file with name molecules-27-00330-i025.jpg 1520 (CDK1) Antiproliferative activity against hepatocellular carcinoma (HepG2, Huh7, and SNU-475), colon cancer (HCT116), and renal cancer (UO-31) cell lines (IC50 = 0.028, 1.83, 1.70, 0.035, and 2.24 µM, respectively).
graphic file with name molecules-27-00330-i026.jpg 88 (CDK14) Antiproliferative activity against HCT116 colorectal cancer cell line (IC50 = 1.14 µM).
graphic file with name molecules-27-00330-i027.jpg 8.63 (CDK1)
0.30 (CDK2)
Inhibitory effect against HDAC1, HDAC2, and HDAC3 (IC50 = 6.40, 0.25, and 45.0 nM, respectively).
Antiproliferative activity against HCT116 colorectal cancer cell line (IC50 = 0.71 µM).
graphic file with name molecules-27-00330-i028.jpg 9 (CDK12)
5.8 (CDK13)
-
EGFR graphic file with name molecules-27-00330-i029.jpg 210 Antiproliferative effect against MCF-7 breast cancer cell line (IC50 = 0.30 μM).
FGFR graphic file with name molecules-27-00330-i030.jpg 0.2 (FGFR1)
2.5 (FGFR2)
1.8 (FGFR3)
165 (FGFR4)
Orally bioavailable, clinical candidate for lymphoma, glioma, lung, breast, gastric, and esophageal types of cancer.
graphic file with name molecules-27-00330-i031.jpg 9.3 (FGFR1)
7.6 (FGFR2)
22 (FGFR3)
290 (FGFR4)
Antiproliferative IC50 values against gastric SNU-16 and colon HCT116 cancer cell lines are 17 nM and 5.9 µM, respectively.
graphic file with name molecules-27-00330-i032.jpg 0.75 (FGFR1)
0.5 (FGFR2)
3.05 (FGFR3)
87.9 (FGFR4)
Antiproliferative activity against FGFR-2-amplified SNU-16 gastric cancer cell line (IC50 = 85.64 nM).
IKK graphic file with name molecules-27-00330-i033.jpg - Antiproliferative activity against HeLa cervical cancer cell line (IC50 = 14.2 μg/mL).
IRAK4 graphic file with name molecules-27-00330-i034.jpg 5 Strong potency (IC50 = 83 nM) against lipopolysaccharide-induced THP1-XBlue cells.
graphic file with name molecules-27-00330-i035.jpg 0.4 Good permeability (25 × 10−6 cm/s) in MDCK cells.
graphic file with name molecules-27-00330-i036.jpg 0.51 -
ITK graphic file with name molecules-27-00330-i037.jpg Ki = 0.1 nM Multi-kinase inhibitor.
graphic file with name molecules-27-00330-i038.jpg Ki = 0.5 nM Higher kinase selectivity, permeability, and oral bioavailability than compound 37.
graphic file with name molecules-27-00330-i039.jpg Ki = 0.09 nM Improved potency, selectivity, and less toxicity.
JAK graphic file with name molecules-27-00330-i040.jpg 3.4 (JAK1)
2.2 (JAK2)
3.5 (JAK3)
Antiproliferative activity: IC50 against PC-3 IC50 = 1.08 μM, MCF-7 IC50 = 1.33 μM, HEL IC50 = 1.08 μM, K562 IC50 = 0.77 μM, MOLT4 IC50 = 1.61 μM.
graphic file with name molecules-27-00330-i041.jpg - Antiproliferative activity against HEL (IC50 = 0.35 μM) and K562 (IC50 = 0.37 μM).
Inline graphic Ki = 2.5 nM (JAK2) Potent inhibitory activity in a JAK2-driven SET2 cell-based assay (IC50 = 131 nM).
Low potential for reversible inhibition of five major human CYP450 isozymes, and good in vitro permeability profile.
graphic file with name molecules-27-00330-i043.jpg Ki = 0.21 nM (JAK1)
Ki = 0.088 nM (JAK2)
IC50 of 4.7 nM in IL-13 stimulated BEAS-2B cells.
graphic file with name molecules-27-00330-i044.jpg Ki = 0.31 nM (JAK1)
Ki = 0.14 nM (JAK2)
IC50 of 6.4 nM in the IL-13-pSTAT6 cell-based assay.
graphic file with name molecules-27-00330-i045.jpg 75(JAK1)
1.1 (JAK2)
360 (JAK3)
In vivo reduction of reticulocytes and subsequent reductions in red blood cell mass as well as a decrease in platelets.
JNK graphic file with name molecules-27-00330-i046.jpg 2800 (JNK1) In vivo anti-inflammatory activity against carrageenan-induced paw edema model in rats.
graphic file with name molecules-27-00330-i047.jpg 227 (JNK3) -
LRRK graphic file with name molecules-27-00330-i048.jpg 9 (LRRK2) -
Inline graphic
(GNE-0877)
0.7 (LRRK2) Improved human hepatocyte stability, brain exposure, and lower ability to inhibit or induce CYP compared to compound 48.
Inline graphic
(GNE-9605)
2 (LRRK2) Improved human hepatocyte stability, brain exposure, and lower ability to inhibit or induce CYP compared to compound 48.
graphic file with name molecules-27-00330-i051.jpg - -
graphic file with name molecules-27-00330-i052.jpg Ki = 84 nM (wild-type LRRK2) and 39 nM (G2019S mutant type LRRK2) 98% oral bioavailability.
LsrK graphic file with name molecules-27-00330-i053.jpg 119,000 -
MEK/ERK graphic file with name molecules-27-00330-i054.jpg - Antiproliferative activity against the A375P melanoma cell line (IC50 = 6.7 µM).
graphic file with name molecules-27-00330-i055.jpg - Antiproliferative activity against the MDA-MB-435 melanoma cell line (IC50 = 2.7 µM).
Kinase inhibition was confirmed by Western blotting.
IC50 = 0.30 µM against COX-2.
graphic file with name molecules-27-00330-i056.jpg - IC50 = 91 nM against recombinant proteins of the RAF-MEK-ERK cascade.
GI50 of 1.18, 2.11, and 0.26 μM against HeLa, MCF-7, and A549 cell lines, respectively.
P38α/MAPK14 graphic file with name molecules-27-00330-i057.jpg 22 Inhibition of TNF-α production in lipopolysaccharide-stimulated THP-1 human cells.
In vivo anti-inflammatory activity.
Inline graphic 135 Poor cellular permeability due to its highly charged carboxylate group.
Its ethyl ester analogue could inhibit phosphorylation of MK2 in HeLa cells (IC50 value = 6 µM) but its IC50 value against p38α is 639 nM.
Inline graphic
(VPC00628)
7 High selectivity against p38α and p38β.
Inline graphic 515 Antiproliferative activity against RPMI-8226 and K-562 leukemia cell lines in addition to the MDA-MB-468 breast cancer cell line (IC50 values are 1.71, 3.42, and 6.70 µM, respectively).
PDK4 graphic file with name molecules-27-00330-i061.jpg 84 Enhanced glucose tolerance in a diet-induced obesity model in mice.
Alleviated the allergic reactions in a passive cutaneous anaphylaxis model in mice.
Pim graphic file with name molecules-27-00330-i062.jpg Ki = 0.073 nM (Pim1), 0.473 (Pim2), and 0.041 (Pim3) Antiproliferative activity against MM1.s myeloma cell line (IC50 = 0.64 µM).
graphic file with name molecules-27-00330-i063.jpg Ki = 0.03 nM (Pim1), 0.1 (Pim2), and 0.02 (Pim3) Promising in vivo activity against MM1.s and RPMI 8226 mice models of multiple myeloma.
RAF graphic file with name molecules-27-00330-i064.jpg - Antiproliferative activity against the A375P melanoma cell line (IC50 = 4.5 µM).
graphic file with name molecules-27-00330-i065.jpg 0.04 (wild-type B-RAF) Its trans isomer (with the hydroxyl group behind the plane) is less potent against the kinase (IC50 = 0.09 nM).
graphic file with name molecules-27-00330-i066.jpg 330 (V600E-B-RAF) Antiproliferative activity against WM266.4 and A375 melanoma cell lines with IC50 values of 2.63 and 3.16 µM, respectively
graphic file with name molecules-27-00330-i067.jpg 770 (V600E-B-RAF) and 1500 (RAF1) One-digit micromolar IC50 values against different cancer cell lines.
graphic file with name molecules-27-00330-i068.jpg 2.98 (V600E-B-RAF) Antiproliferative activity against the A375 melanoma cells (IC50 = 1.82 µM).
graphic file with name molecules-27-00330-i069.jpg 99.17% inhibition at 10 µM (V600E-B-RAF) IC50 values within sub-micromolar range (0.27–0.92 µM) against nine cancer cell lines of nine cancer types. Against the A375 melanoma cell line, its IC50 value is 0.82 µM.
graphic file with name molecules-27-00330-i070.jpg - 78.04%, 74.47%, and 72.46% inhibition at 10 µM concentration against RAF1, V600E-B-RAF, and V600K-B-RAF kinases, respectively.
graphic file with name molecules-27-00330-i071.jpg 7 (V600E-B-RAF) Mean IC50 value against the NCI nine subpanels was within the range of 1.98–3.26 µM.
graphic file with name molecules-27-00330-i072.jpg 390 (V600E-B-RAF) IC50 values are within the submicromolar range against most of the tested cell lines (NCI-60 panel).
Induced apoptosis in the RPMI-8226 leukemia cell line with an EC50 of 1.52 µM.
ROS graphic file with name molecules-27-00330-i073.jpg 13.6 -
Src graphic file with name molecules-27-00330-i074.jpg 59% inhibition at 10 µM concentration Antiproliferative activity against CCRF-CEM and MOLT-4 leukemia cell lines (IC50 = 1.00 µM against both of them).
TGFβ/ALK graphic file with name molecules-27-00330-i075.jpg 684 (R206H mutated ALK2) Promising lead compound for treatment of fibrodysplasia ossificans progressive.
graphic file with name molecules-27-00330-i076.jpg 25.6 (R206H mutated ALK2) Good permeability and in vivo pharmacokinetic properties.
graphic file with name molecules-27-00330-i077.jpg 9.4 Promising lead compound for treatment of fibrodysplasia ossificans progressive.
Improved aqueous solubility compared to compound 75.
graphic file with name molecules-27-00330-i078.jpg 13 (TGFβ type 1/ALK5) Inhibited luciferase activity by 80% at 0.1 μM.
In-cell kinase inhibition.
graphic file with name molecules-27-00330-i079.jpg 280 (TGFβ type 1/ALK5) >35-fold more selective against ALK5 compared to p38α MAPK.
graphic file with name molecules-27-00330-i080.jpg 18 (TGFβ type 1/ALK5) In-cell kinase inhibition.
graphic file with name molecules-27-00330-i081.jpg 69 (TGFβ type 1/ALK5) Inhibitory effects against the p38α kinase (IC50 = 104 nM).
graphic file with name molecules-27-00330-i082.jpg 30 (TGFβ type 1/ALK5) Potential inhibitor of collagen I and α-SMA protein and mRNA expressions in TGFβ-induced LX-2 human hepatic stellate cells.
Trk graphic file with name molecules-27-00330-i083.jpg 2 (TrkA)
8 (TrkB)
-
graphic file with name molecules-27-00330-i084.jpg - Potent inhibitor of TrkA with an IC50 value of 0.5 nM in a cellular assay.
29% oral bioavailability.
High aqueous solubility and safety against hERG.
graphic file with name molecules-27-00330-i085.jpg - Potent inhibitor of TrkA with an IC50 value of 0.5 nM in a cellular assay.54% oral bioavailability.
High aqueous solubility and safety against hERG.
graphic file with name molecules-27-00330-i086.jpg 2.7 (TrkA) Higher selectivity against TrkA than TrkB and TrkC.
graphic file with name molecules-27-00330-i087.jpg - Rapid association rate with the TrkA crystal structure, thus binds to the inactive conformation of the kinase (i.e., type II TrkA inhibitor).
graphic file with name molecules-27-00330-i088.jpg 0.2 (TrkA) In vivo activity in CFA-induced thermal hypersensitivity model.
VEGFR graphic file with name molecules-27-00330-i089.jpg 0.95 (VEGFR2) Decreased the proliferation of VEGF stimulated HUVEC with an IC50 of 0.30 nM.
In vivo anticancer activity in a mouse xenograft model of human lung adenocarcinoma A549 cells.
graphic file with name molecules-27-00330-i090.jpg 97 (VEGFR2) Antiproliferative activity against HT-29 colon cell line (IC50 = 3.32 μM), PC-3 prostate cells (IC50 = 3.17 μM), A549 lung cells (IC50 = 3.87 μM), and U87MG glioblastoma cells (IC50 = 6.77 μM).
graphic file with name molecules-27-00330-i091.jpg - In-cell kinase inhibition.
Antiproliferative activity against the MCF-7 cell line (IC50 = 18.35 µM).
Multikinase inhibitors graphic file with name molecules-27-00330-i092.jpg Inhibitor of VEGFR2, Src, B-RAF (wild-type), V600E-B-RAF, EGFR (wild-type), and L858R-EGFR with IC50 values of 34, 399, 270, 592, 113, and 31 nM, respectively.
graphic file with name molecules-27-00330-i093.jpg Multi-kinase inhibitory effects against AKT2, GSK-3β, PI3K, EGFR, IGFR, CDK2, Aurora A, and MAPK. Antiproliferative activity against SNU449 hepatocellular carcinoma cell line.
graphic file with name molecules-27-00330-i094.jpg Multikinase inhibitory effects against AKT2, GSK-3β, PI3K, EGFR, IGFR, CDK2, Aurora A, and MAPK. Antiproliferative activity against SNU449 hepatocellular carcinoma cell line.
graphic file with name molecules-27-00330-i095.jpg Dual KDR/Aurora B activity Narrow therapeutic index.
graphic file with name molecules-27-00330-i096.jpg Inhibitory effect against B-RAF (wild-type), V600E-B-RAF, p38α, JNK1, and JNK2 kinases (inhibition % values at 10 µM concentration are 72.56%, 93.67%, 86.54%, 99.05%, and 98.49%, respectively). Antiproliferative activity against the A498 renal carcinoma cell line (IC50 = 0.33 µM).
JNK1 and JNK2 are the most sensitive among them (IC50 = 350 and 360 nM, respectively).
graphic file with name molecules-27-00330-i097.jpg >94% inhibition of AKT1, AKT2, V600E-B-RAF, EGFR, p38α, and PDGFRβ at 100 µM. Antiproliferative activity against MCF7 breast cancer cell line (IC50 = 6.53 µM).
graphic file with name molecules-27-00330-i098.jpg c-Kit, FLT-3, VEGFR-2, EGFR, PDGFR, and Pim-1 kinases (IC50 260–610 nM). Antiproliferative activity against A549 (lung), H460 (lung), HT29 (colon), MKN-45 (gastric), U87MG (glioma), and SMMC-77217721 (hepatic) cancer cell lines (IC50 values from 0.29–0.42 µM).
graphic file with name molecules-27-00330-i099.jpg JAK2, JAK3, Aurora A, and Aurora B (IC50 = 166, 57, 939, 583 nM, respectively). Antiproliferative activity against K562 leukemia cell line and HCT116 colon cancer cell line (IC50 = 6.726 and 15.054 µM, respectively).
graphic file with name molecules-27-00330-i100.jpg Inhibited B-RAF, C-RAF, and Src kinases both in vitro and in vivo. In vivo activity and phase I clinical trials in volunteers with solid tumors.
Increased the progression-free survival in a patient suffering from KRAS (G12V) spindle cell sarcoma.