TABLE 1.
Data on the L. garvieae strains analyzed in this study
| Isolate(s) | Source | Countrya | Yr of isolation | Phenotypic characteristicsb
|
Biotype | Pulsotype | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Sac | Tag | Man | Cedex | Pyra | β-Nag | ||||||
| CP1 | Trout | Spain/SF1 | 1991 | + | + | + | − | + | − | 1 | B |
| CP2 | Trout | Spain/SF1 | 1992 | + | + | + | − | + | − | 1 | B |
| 94/32 | Trout | Spain/SF1 | 1994 | + | + | + | − | + | − | 1 | B |
| 1581, 95/861 | Trout | Spain/SF2 | 1995 | + | + | + | + | + | − | 2 | A1 |
| 1336 | Trout | Spain/SF3 | 1996 | + | + | + | + | + | − | 2 | A1 |
| 1182 | Trout | Spain/SF4 | 1996 | + | + | + | + | + | − | 2 | A1 |
| 1184, 1185 | Trout | Spain/SF5 | 1996 | + | + | + | + | + | − | 2 | A1 |
| 1987, 1999, 2000, 2013, 2014, 2001, 2002, 2007, 2005, 2006, 4316 | Trout | Spain/SF1 | 1998 | + | + | + | + | + | − | 2 | A1 |
| 1982 | Trout | Spain/SF6 | 1998 | + | + | + | + | + | − | 2 | A1 |
| 1989, 1990, 1919, 1758, 1964, 1759, 1940, 1944, 1957, 1967 | Trout | Spain/SF7 | 1998 | + | + | + | + | + | − | 2 | A1 |
| 1935, 1936, 1909, 1893, 1934, 1955, 1954, 1924, 1925 | Trout | Spain/SF8 | 1998 | + | + | + | + | + | − | 2 | A1 |
| 1958, 1981, 1956, 1975, 2016, 2017 | Trout | Spain/SF9 | 1998 | + | + | + | + | + | − | 2 | A1 |
| 1960, 1961, 1988 | Trout | Spain/SF10 | 1998 | + | + | + | + | + | − | 2 | A1 |
| 1966 | Trout | Spain/SF11 | 1998 | + | + | + | + | + | − | 2 | A1 |
| 1959, 1986, 1985, 4294 | Trout | Spain/SF12 | 1998 | + | + | + | + | + | − | 2 | A1 |
| 864 | Trout | Portugal | 1995 | + | + | + | + | + | − | 2 | A2 |
| 2398 | Trout | France | 1998 | − | + | + | − | + | − | 3 | D |
| 1691 | Trout | Italy/IF1 | 1997 | − | − | + | − | − | − | 4 | F2 |
| 1683 | Trout | Italy/IF2 | 1997 | − | − | + | − | − | − | 4 | F1 |
| 1684 | Trout | Italy/IF3 | 1997 | − | − | + | − | − | + | 5 | E |
| 1685, 1689 | Trout | Italy/IF4 | 1997 | − | − | + | + | − | + | 6 | F1 |
| 1687 | Trout | Italy/IF5 | 1997 | − | − | + | + | − | + | 6 | E |
| 2008, 4284 | Water | Spain/SF1 | 1998 | + | + | + | + | + | − | 2 | A1 |
| 4289 | Water | Spain/SF1 | 1998 | − | + | + | − | + | − | 7 | K |
| 34, 41, 42 | Cow | Spain | 1999 | − | + | + | − | + | − | 7 | J |
| 1205, 1193, 1183 | Buffalo | Brazil | 1998 | − | − | − | − | + | − | 8 | P1 |
| 1195 | Buffalo | Brazil | 1998 | − | − | − | − | + | + | 9 | P2 |
| IM-86 | Human | Brazil | 1998 | − | − | + | + | − | − | 10 | Q |
| 306-79 | Human | United States | 1997 | − | + | + | + | + | − | 11 | S |
| 673-80, 588-80 | Human | United States | 1980 | − | − | + | + | − | − | 10 | R |
| 2182-81 | Human | United States | 1981 | + | + | + | − | + | − | 1 | H |
| 1108-86 | Human | United States | 1986 | + | + | + | − | + | − | 1 | N |
| 2486-87 | Human | United States | 1987 | + | + | + | + | + | − | 2 | O |
| 364-88 | Human | United States | 1988 | + | + | + | − | − | − | 12 | G |
| 240-88 | Human | United States | 1988 | + | + | + | − | − | − | 12 | L |
| 66-90 | Human | United States | 1990 | − | + | + | − | − | − | 13 | M |
| L. garvieae ATCC 43931T | Cow | United Kingdom | 1984 | − | − | + | − | − | − | 4 | I |
| E. seriolicida ATCC 49156T | Yellowtail | Japan | 1991 | − | − | + | + | − | − | 10 | C |
a
SF and IF are different fish farms in Spain and Italy, respectively. Fish farms SF1, SF3, SF4, and SF6 are located in the central region of Spain; SF2, SF5, and SF12 are located in the north of Spain; SF7 is in the northwest of Spain; SF8, SF9, and SF10 are located in the west of Spain; SF11 is located in the south of Spain. The IF fish farms are located in the north of Italy.
b
Sac, Tag, Man, and Cedex, acidification of saccharose, tagatose, mannitol, and cyclodextrin, respectively. Pyra and β-Nag, presence of the respective enzymes.