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. 2021 Dec 15;13(12):13981–13992.

Table 2.

Multilocus sequence typing

Locus Primers (specific amplification) Amplicon size Polymorphisms
SOD F1: AATAAGGGTTTAATTAGTCTT 762 bp 110, 191, 215
R1: CTTACATTCCATATATTTTCA 670 bp
F2: GAACCTTATCTTTCTCAT
R2: TCATTTTAGTATTTAGTCTC
mtLSU rRNA F1: GTGAAAGCCCAGAGTCCC 1216 bp 54-57, 80, 85, 248, 288
R1: CCGAGTTCCTTCGCAATA 738 bp
F2: CTTTTGCATAATGGGTCAG
R2: TTTTCGGCGAATAGGATTT
CYB F1: TATGGTTCATTATCAGGACTG 1016 bp 279, 299, 348, 362, 369, 516, 547, 566, 675, 742, 832-833, 838
R1: ACCAGAGGAATAACAACTAAG 942 bp
F2: ACAGATTATTACGGGTGT
R2: GTAGCATATTGTCCAAGC

SOD, the superoxide dismutase; mtLSU rRNA, mitochondrial large subunit of ribosomal RNA; CYB, cytochrome b.