Table 5.
Multilocus sequence typing analysis of samples from liver transplant recipients with PCP and PCP controls
| Polymorphisms | Patient number | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
| |||||||||||
| P6 | P8 | P9 | P10 | C4 | C5 | C6 | C8 | C9 | C10 | C11 | |
| SOD genotype | SOD2 | SOD1 | Mixed (SOD2/SOD1) | SOD2 | |||||||
| 110 | TT | / | CC | / | / | / | / | / | CT | TT | / |
| 191 | TT | / | TT | / | / | / | / | / | TT | TT | / |
| 215 | CC | / | TT | / | / | / | / | / | TC | CC | / |
| mtLSU rRNA genotype | Allele 8 | Allele 8 | Allele 3 | Allele 8 | Allele 8 | Allele 8 | |||||
| 54-57 | 4xA/4xA | / | / | / | / | 4xA/4xA | 4xA/4xA | 4xA/4xA | 4xA/4xA | 4xA/4xA | / |
| 80 | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC |
| 85 | TT | CT | TT | CC | TT | TT | CC | TT | TT | TT | CC |
| 248 | CC | CT | CC | CC | CC | CC | TT | CC | CC | CC | TT |
| 288 | AA | / | / | / | / | AA | AA | AA | AA | AA | / |
| CYB genotype | Mixed (CYB10/CYB11) | CYB2 | Mixed (CYB1/CYB6) | CYB1 | CYB2 | CYB2 | |||||
| 279 | CC | / | / | / | / | CC | CC | CC | CC | CC | / |
| 299 | CC | / | / | / | / | CC | CC | CC | CC | CC | / |
| 348 | AA | / | / | / | / | AA | AA | AA | AA | AA | / |
| 362 | CC | / | / | / | / | CC | CC | CC | CC | CC | / |
| 369 | GG | / | / | / | / | GG | GG | GG | GG | GG | / |
| 516 | CC | / | / | / | / | CC | CT | CC | CC | CC | / |
| 547 | CC | / | / | / | / | CC | CC | CC | CC | CC | / |
| 566 | CT | / | / | / | / | CC | CC | CC | CC | CC | / |
| 675 | AA | / | / | / | / | AA | AA | AA | AA | AA | / |
| 742 | CC | / | / | / | / | CC | CC | CC | CC | CC | / |
| 832-833 | TT/TT | / | / | / | / | TT/TT | TT/TT | TT/TT | TT/TT | TT/TT | / |
| 838 | CT | / | / | / | / | TT | CC | CC | TT | TT | / |
PCP, Pneumocystis pneumonia; SOD, superoxide dismutase; mtLSU rRNA, mitochondrial large subunit of ribosomal RNA; CYB, cytochrome b; P, transplant recipients with PCP; C, immunocompromised patients with PCP as a control group. /, sequence typing failure; _, new genotypes are underlined.