Table 1.
Primers used in RT-PCR and qRT-PCR.
Primer | Sequence (from 5′ to 3′) | Purpose |
---|---|---|
PGRP-SC2 5′RACE outer | CCTTAGCGGCAGCAATCT | RACE |
PGRP-SC2 5′RACE inner | CCACGACCCTCATACACT | RACE |
PGRP-SC2 3′RACE outer | GCAAGTGTATGAGGGTCG | RACE |
PGRP-SC2 3′RACE inner | TTACTGCTCCACCCAAAC | RACE |
QPGRP-LB F | GCGTGGCTGGAATGACATTG | qRT-PCR |
QPGRP-LB R | CGGTCATTGTATTTGGGCGC | qRT-PCR |
QPGRP-SB F | TGGCATTGTCTTCATCGGCA | qRT-PCR |
QPGRP-SB R | CAGATAACCCTTTTGCACCGC | qRT-PCR |
QPGRP-SC2 F | GGGTCGTGGTTGGAGTACAG | qRT-PCR |
QPGRP-SC2 R | GATCTGAGCGGCTGTTGGAA | qRT-PCR |
QRpL32 F | CCCGTCATATGCTGCCAACT | qRT-PCR |
QRpL32 R | GCGCGCTCAACAATTTCCTT | qRT-PCR |
QDiptericin F | GCATAGATTTGAGCCTTGACACAC | qRT-PCR |
QDiptericin R | GCCATATCGTCCGCCCAAAT | qRT-PCR |
PGRP-LB T7F | GGATCCTAATACGACTCACTATAGGATGCCCAGCGCCTGTTAC | dsRNA synthesis |
PGRP-LB T7R | GGATCCTAATACGACTCACTATAGGTGCGGCCACGTCGTAATC | dsRNA synthesis |
PGRP-SB T7 F | GGATCCTAATACGACTCACTATAGGTGTTTTGCGCTCAGGATCCA | dsRNA synthesis |
PGRP-SB T7R | GGATCCTAATACGACTCACTATAGGTGGCCCAGCAGTGTGTAATT | dsRNA synthesis |
PGRP-SC2 T7 F | GGATCCTAATACGACTCACTATAGGGGCTTTCAAGACTTTCCTC | dsRNA synthesis |
PGRP-SC2 T7R | GGATCCTAATACGACTCACTATAGGAACCACGACCCTCATACAC | dsRNA synthesis |
EGFP T7L | GGATCCTAATACGACTCACTATAGGACGTAAACGGCCACAAGTTC | dsRNA synthesis |
EGFP T7R | GGATCCTAATACGACTCACTATAGGAAGTCGTGCTGCTTAATGTG | dsRNA synthesis |
Primers starting with Q were used for qRT-PCR; the underlined sections indicate T7 polymerase promoter.