SMILES	Simplified Molecular-Input Line-Entry System
CANDOCK	Chemical Atomic Network based Docking
CHARMM	Chemistry at Harvard Macromolecular Mechanics
ROC	Receiver operating characteristics curve
PC	Predictiveness curve
TPF	True positive fraction
FPF	False positive fraction
PDB	Protein Data Bank
ROC AUC	Area under the receiver operating characteristics curve
EF	Enrichment factor
BEDROC	Boltzmann-enhanced discrimination of ROC
RIE	Robust initial enhancement
TG	Total gain
Eis	Enhanced intracellular survival
HIV	Human immunodeficiency virus
FIV	Feline immunodeficiency virus
RAS/MAPK	Rat sarcoma/mitogen-activated protein kinase
GTP	Guanosine triphosphate
GlmS	Glucosamine/fructose-6-phosphate aminotransferase
PKM	Pyruvate kinase M
PEP	Phosphoenolpyruvate
ADP	Adenosine diphosphate
ATP	Adenosine triphosphate
HA	Hemagglutinin
AIDS	Acquired immunodeficiency syndrome
HAART	Highly active antiretroviral therapy
PPAR	Peroxisome proliferator-activated receptor
COX-2	Cyclooxygenase-2
EC50	Half maximal effective concentration
GP	Glycogen phosphorylase
PLA2	Phospholipase A2
VEGFR	Vascular endothelial growth factor receptor
VEGF	Vascular endothelial growth factor
MMP	Matrix metalloproteinase
FPPS	Farnesyl pyrophosphate synthase
IPP	Isopentenyl pyrophosphate
GDH1	Glutamate dehydrogenase 1
RMSD	Root-mean-square deviation